Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01990 ATGGAGTTACTTACCAAAGAGATCATTCTTTCTATTGCTGTCATTGTTCTTTCTTCTTCAGGAATTTGTAGAGCAGTGGATTGTGGTGGCCCTGAGATTTCAACCACAATCGTAGTTGATAAATCCAACACACCACCAAATTTCGCATCAATTCAAGCTGCCATTGATTCAATACCAACGAGCAACTCCAAATGGGTGAAAATTCAGATAAATGCTGGCACATACAAAGAGATGGTTAACATTCCAGTGGATAAGCCATGCATCTTTATCCAAGGCCAAGGTGCAGATGTTACAACCATTACATACGATGACCACTCCGCAGTAAATACTAGTGCCACATTCTCTGCCTTTTCAAACAACGTTGTTGCATCAGATATTACTTTTCTGAACTCGTACGGTTTGGAAACACTAGAGAATTTGATAATACATAACATAAGTTATGGAATAAGGACTCCATCGGTGGCTGCAAGAATATCTGGAGACAAATGTGCCTTTTATAATTGTAATTTTATTGGTTTTCAAGATACAGTTTGGGATGAATTAGGTCGTCATTATTTCAAAAATTGCATGATTGAAGGTGCCGTGGATTTCATATTCGGTGATGGACAATCCTACTACCAGGATTGTGTGTTGAACGCGACTGCCTTGGGTTGCATAACAGCACAAGCACGCAATGTAAGTAGTGATCCCTCTGGTTTTGTGTTTGAAGGAGGTTCTGTGATAGGTAGCAGTAATGGAGACTCGTTATTAGGAAGAGGGTATCGTTATTGCTCTAGGGTTATATTTTATAAAATGGACCTTGGTAGTGTGGTTCGGCCTGTAGGATGGGATGCTTGGAATGCCAAAGACAACGTGACTTGTCTTTTCTACTCTGAGATTGGATGTACAGGAGCAGGCTTTAGTACTTCTCAACGTGTTCCTTGGGAAAAGAATTTGACAGACACAGATTTTAACAACAATTTTTCTCTTTCGGTGTTCATCAATCAAGATGGTTGGCTCACACAATTACCACAAAAGAAATAG 1023 0.3978 MELLTKEIILSIAVIVLSSSGICRAVDCGGPEISTTIVVDKSNTPPNFASIQAAIDSIPTSNSKWVKIQINAGTYKEMVNIPVDKPCIFIQGQGADVTTITYDDHSAVNTSATFSAFSNNVVASDITFLNSYGLETLENLIIHNISYGIRTPSVAARISGDKCAFYNCNFIGFQDTVWDELGRHYFKNCMIEGAVDFIFGDGQSYYQDCVLNATALGCITAQARNVSSDPSGFVFEGGSVIGSSNGDSLLGRGYRYCSRVIFYKMDLGSVVRPVGWDAWNAKDNVTCLFYSEIGCTGAGFSTSQRVPWEKNLTDTDFNNNFSLSVFINQDGWLTQLPQKK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01990 340 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Viun7g01990 340 FunFam Pectinesterase 31 337 - -
Viun7g01990 340 Gene3D - 30 339 IPR012334 -
Viun7g01990 340 SUPERFAMILY Pectin lyase-like 33 334 IPR011050 -
Viun7g01990 340 Pfam Pectinesterase 45 329 IPR000070 GO:0030599|GO:0042545
Viun7g01990 340 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01990 Viun-Chr7 24873678 24875219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01990 10 282 Carbohydrate Esterase AT2G19150 40.569 4.26e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01990 - - vun:114192590 561.607