Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01989 ATGGAGTTACTTACCAGAGAGATCATTCTTTGTATCGTTGTCATTCTTATTTCTTCTTCGGGGATTTGTACAGCAGTAGATTGTGGTGGCCCTGAATTTTCAAGCACAATCGTGGTTGATAAATCCAACACATCACCAAATTTCACATCAATTCAAGCTGCCATTGATTCAATACCAACGAGCAACTCCAAATGGGTGAAAATTCAGATAAATGCTGGAATATACAAAGAGAAGGTTAACATCCCAGTGGATAAGCCATGCATCTTTATCAAAGGCCAAGGTGCAGATGTTACCACCATTACATACGATGACTACTCGGAAATAACTACTAGTTCCACATTCTCTTCCTTTTCAAACAATCTTGTTGCATCAGATATTACTTTTCAGAACTCGTACGGTTTGAAAATATTAGAGAATTTGCGAAGACATAGGAAAAGTTATGGAATAAGGACTCCATCGTTGGCGGCAAGAATATCTGGAGACAAATGCGCCTTTTATAAATGTAAGTTTATCGGGTTTCAAGATACTCTTTGGGATGAATTAGGTCGTCATTATTTCAAAAATTGCATGATTGAAGGTGCTGTGGACTTCATATTTGGTGATGGACAATCCTACTATAAGGATTGTGTGTTGAATGTAACTTCTTTGGGTTGCATAACAGCACAAGCACGCAATGTAAGTAGTGATCCATCTGGTTTTGTGTTTGAAGGAGGTTCTGTGATAGGTAGTGGTAATGAAGACTCATTATTGGGAAGAGGGTATCGTCATTGCTCTAGGGTTATATTTTATAAAATGAACCTTAGTAGTGTGGTTCGGCCTGTAGGATGGGATGCTTGGAATGCCAAAGACGACGTGACTTGTCTTTTCTACTCTGAAATTGAATGTATAGGACCAGGTTCCAGTACTTCTCAACGTGTTCCTTGGGAAAAGAATTTGACAGAAACAGATTTTTACAAACATTTTCCGTTCGAGAATTCATCAATAAAGATGGTTGGCTGTCACACTTACCATAAAGGAAGTAGAGATATATATCTCTTATTATGTAATTTAGACACCTTGTCTTATGAAATATAA 1074 0.3762 MELLTREIILCIVVILISSSGICTAVDCGGPEFSSTIVVDKSNTSPNFTSIQAAIDSIPTSNSKWVKIQINAGIYKEKVNIPVDKPCIFIKGQGADVTTITYDDYSEITTSSTFSSFSNNLVASDITFQNSYGLKILENLRRHRKSYGIRTPSLAARISGDKCAFYKCKFIGFQDTLWDELGRHYFKNCMIEGAVDFIFGDGQSYYKDCVLNVTSLGCITAQARNVSSDPSGFVFEGGSVIGSGNEDSLLGRGYRHCSRVIFYKMNLSSVVRPVGWDAWNAKDDVTCLFYSEIECIGPGSSTSQRVPWEKNLTETDFYKHFPFENSSIKMVGCHTYHKGSRDIYLLLCNLDTLSYEI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01989 357 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Viun7g01989 357 FunFam Pectinesterase 32 329 - -
Viun7g01989 357 SUPERFAMILY Pectin lyase-like 34 320 IPR011050 -
Viun7g01989 357 Gene3D - 31 330 IPR012334 -
Viun7g01989 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 319 - -
Viun7g01989 357 Pfam Pectinesterase 42 310 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01989 Viun-Chr7 24865296 24869253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01989 10 282 Carbohydrate Esterase AT2G19150 40.214 1.20e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01989 - - vun:114192590 718.768