Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01988 ATGGAGTTACTTACCAGAGAGATCATTCTTTGTATCGTTGTCATTCTTATTTCTTCTTCGGGGATTTGTACAGCAGTAGATTGTGGTGGCCCTGAATTTTCAAGCACAATCGTGGTTGATAAATCCAACACATCACCAAATTTCACATCAATTCAAGCTGCCATTGATTCAATACCAACGAGCAACTCCAAATGGGTGAAAATTCAGATAAATGCTGGAATATACAAAGAGAAGGTTAACATCCCAGTGGATAAGCCATGCATCTTTATCAAAGGCCAAGGTGCAGATGTTACCACCATTACATACGATGACTACTCGGAAATAACTACTAGTTCCACATTCTCTTCCTTTTCAAACAATCTTGTTGCATCAGATATTACTTTTCAGAACTCGTACGGTTTGAAAATATTAGAGAATTTGCGAAGACATAGGAAAAGTTATGGAATAAGGACTCCATCGTTGGCGGCAAGAATATCTGGAGACAAATGCGCCTTTTATAAATGTGCTGTGGACTTCATATTTGGTGATGGACAATCCTACTATAAGGATTGTGTGTTGAATGTAACTTCTTTGGGTTGCATAACAGCACAAGCACGCAATGTAAGTAGTGATCCATCTGGTTTTGTGTTTGAAGGAGGTTCTGTGATAGGTAGTGGTAATGAAGACTCATTATTGGGAAGAGGGTATCGTCATTGCTCTAGGGTTATATTTTATAAAATGAACCTTAGTAGTGTGGTTCGGCCTGTAGGATGGGATGCTTGGAATGCCAAAGACGACGTGACTTGTCTTTTCTACTCTGAAATTGAATGTATAGGACCAGGTTCCAGTACTTCTCAACGTGTTCCTTGGGAAAAGAATTTGACAGAAACAGATTTTTACAAACATTTTCCGTTCGAGAATTCATCAATAAAGATGGTTGGCTGTCACACTTACCATAAAGGAAGTAGAGATATATATCTCTTATTATGTAATTTAGACACCTTGTCTTATGAAATATAA 999 0.3794 MELLTREIILCIVVILISSSGICTAVDCGGPEFSSTIVVDKSNTSPNFTSIQAAIDSIPTSNSKWVKIQINAGIYKEKVNIPVDKPCIFIKGQGADVTTITYDDYSEITTSSTFSSFSNNLVASDITFQNSYGLKILENLRRHRKSYGIRTPSLAARISGDKCAFYKCAVDFIFGDGQSYYKDCVLNVTSLGCITAQARNVSSDPSGFVFEGGSVIGSGNEDSLLGRGYRHCSRVIFYKMNLSSVVRPVGWDAWNAKDDVTCLFYSEIECIGPGSSTSQRVPWEKNLTETDFYKHFPFENSSIKMVGCHTYHKGSRDIYLLLCNLDTLSYEI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01988 332 Gene3D - 170 305 IPR012334 -
Viun7g01988 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 169 - -
Viun7g01988 332 SUPERFAMILY Pectin lyase-like 34 295 IPR011050 -
Viun7g01988 332 Gene3D - 23 169 IPR012334 -
Viun7g01988 332 Pfam Pectinesterase 42 135 IPR000070 GO:0030599|GO:0042545
Viun7g01988 332 Pfam Pectinesterase 168 285 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01988 Viun-Chr7 24865296 24869256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01988 10 257 Carbohydrate Esterase AT2G19150 35.231 4.37e-47 159