Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01987 ATGGAGTTACTTACCAGAGAGATCATTCTTTGTATCGTTGTCATTCTTATTTCTTCTTCGGGGATTTGTACAGCAGTAGATTGTGGTGGCCCTGAATTTTCAAGCACAATCGTGGTTGATAAATCCAACACATCACCAAATTTCACATCAATTCAAGCTGCCATTGATTCAATACCAACGAGCAACTCCAAATGGGTGAAAATTCAGATAAATGCTGGAATATACAAAGAGAAGGTTAACATCCCAGTGGATAAGCCATGCATCTTTATCAAAGGCCAAGGTGCAGATGTTACCACCATTACATACGATGACTACTCGGAAATAACTACTAGTTCCACATTCTCTTCCTTTTCAAACAATCTTGTTGCATCAGATATTACTTTTCAGAACTCGTACGGTTTGAAAATATTAGAGAATTTGCGAAGACATAGGAAAAGTTATGGAATAAGGACTCCATCGTTGGCGGCAAGAATATCTGGAGACAAATGCGCCTTTTATAAATGTGCTGTGGACTTCATATTTGGTGATGGACAATCCTACTATAAGGACTTGTCTTTTCTACTCTGA 567 0.3827 MELLTREIILCIVVILISSSGICTAVDCGGPEFSSTIVVDKSNTSPNFTSIQAAIDSIPTSNSKWVKIQINAGIYKEKVNIPVDKPCIFIKGQGADVTTITYDDYSEITTSSTFSSFSNNLVASDITFQNSYGLKILENLRRHRKSYGIRTPSLAARISGDKCAFYKCAVDFIFGDGQSYYKDLSFLL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01987 188 SUPERFAMILY Pectin lyase-like 34 185 IPR011050 -
Viun7g01987 188 Gene3D - 22 170 IPR012334 -
Viun7g01987 188 Pfam Pectinesterase 42 170 IPR000070 GO:0030599|GO:0042545
Viun7g01987 188 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01987 Viun-Chr7 24865296 24869262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01987 10 188 Carbohydrate Esterase AT2G19150 30.882 1.29e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01987 - - vun:114192590 337.421