Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01980 ATGTCCGAAGACAAAGACAAAGAGCAGTACGGAGTGCTCCTTTATTACAATTACGCTGAAATTTCAGACCTCAACCACCTCCTCACCTTCTACCACTCCAACTGCACCTCCCTCAACCTACGAGGTCGTGTTCGCCTTTCAACCCATGGTGTCAATGTCACTGTTGGTGGCAATTTGTCCTCTCTCGAGTCCCACATCGAAGCCCTCAAAGCCTACAACTCCTTGTTTCACCGCACCGATTTCAAGCTCGCCACGTGTCATCACCCACTAAACGACAAAGTTGCCCAAGAGTGTGGCTTCACTTCTCTCTCTATTCGGATTGTGGATGAACTTGTTACTCTCAGTTCTCATCCACTGTTAAAAGCGCCTGATATCTCCAATGCTGGAAGCCATCTATCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCAACAACGAGAGTCCAGAAAACGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGGATTGGGAAGTTTGACGTGCCAAATGTTGAGACTTTGGATCCAAAAGTTAGGCAGTACAGTGACTTGTCCTCGTGGATAGATGATAATGGTGACCGGTTGAAAGGAAAAAATATCTTCATGTATTGTACTGGTGGAATTCGGTGTGAGATGGCATCAGCATATATTAAGTCTAAAGGTGCCGGTTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTATTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGTACCTGCCTTATGTGTCAATGTTCATTTGATGATTACACTTCTCGCTGCCGGTGTGCTTATTGCAGAATGCTTGTTTTGGTTTGCCGTAGTTGCGAGAATGAATCTACCGCCTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGAGTCAGCACAGTTAATTGAAAATGGAGAATCAAAAACATCATTGTCAGGTGTCGAGTTCAACAACTTTTCTTCAGATACTATATGTTTACCTCGAGTGCCCAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTGCATGGGTTTCGGCAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTGGCGAAGAAACTAAAGAAAATCACTGAATTTGTTTTTATTGATGCTCCCCATGAATTGCCATTCATTTACCAAACCCCCATGTTTGAGCCCAATGTAAATTGTGCATCATCGTCATTACCATCTAGTCCTCCACCACCATTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGCAGTGGTGTTGACTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGTTGGATATGATATTTCACTATCACACTTGAAGAATGTGTTTTCCCAGGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTGATCTCTGCACTACAAGAAGAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAGGCCATGGAGTCTGGCCCTATCAAGTGTCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGATGGTGATTGTTCTGTGATTGTTGAGCATGATAGTGGTCATATAATTCCTACCAAGTCCCCTTACATTGATGAGATCAAGGATTTCCTTAATCGCTTTCTGTAG 1827 0.433 MSEDKDKEQYGVLLYYNYAEISDLNHLLTFYHSNCTSLNLRGRVRLSTHGVNVTVGGNLSSLESHIEALKAYNSLFHRTDFKLATCHHPLNDKVAQECGFTSLSIRIVDELVTLSSHPLLKAPDISNAGSHLSALDFHSSLHNANNESPENGLVLLDARNLYETRIGKFDVPNVETLDPKVRQYSDLSSWIDDNGDRLKGKNIFMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLMCQCSFDDYTSRCRCAYCRMLVLVCRSCENESTAYVCELCQKQGKAESAQLIENGESKTSLSGVEFNNFSSDTICLPRVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFIDAPHELPFIYQTPMFEPNVNCASSSLPSSPPPPLENCKKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTVGYDISLSHLKNVFSQEGPFDGILGFSQGAAMAALISALQEELKGEMDFKFVVLCSGFALRMKAMESGPIKCPSLHIFGNEHGKDRQIANQTSKELASLYDGDCSVIVEHDSGHIIPTKSPYIDEIKDFLNRFL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01980 608 Gene3D - 121 278 IPR036873 -
Viun7g01980 608 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Viun7g01980 608 Gene3D - 1 112 - -
Viun7g01980 608 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Viun7g01980 608 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 126 263 IPR036873 -
Viun7g01980 608 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Viun7g01980 608 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Viun7g01980 608 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Viun7g01980 608 SMART rhod_4 139 246 IPR001763 -
Viun7g01980 608 FunFam esterase OVCA2 isoform X6 362 608 - -
Viun7g01980 608 SUPERFAMILY alpha/beta-Hydrolases 362 608 IPR029058 -
Viun7g01980 608 Gene3D alpha/beta hydrolase 362 608 IPR029058 -
Viun7g01980 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 607 IPR020936 -
Viun7g01980 608 Pfam Serine hydrolase (FSH1) 364 599 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01980 Viun-Chr7 24813475 24818937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01980 5 608 Sulfurtransferasese or Rhodanese AT1G09280 63.487 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01980 - - gmx:100786152 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01980 7 24813475 24818937 Viun7g01980 7 24813475 24818937 ECH