Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01979 ATGTCCGAAGACAAAGACAAAGAGCAGTACGGAGTGCTCCTTTATTACAATTACGCTGAAATTTCAGACCTCAACCACCTCCTCACCTTCTACCACTCCAACTGCACCTCCCTCAACCTACGAGGTCGTGTTCGCCTTTCAACCCATGGTGTCAATGTCACTGTTGGTGGCAATTTGTCCTCTCTCGAGTCCCACATCGAAGCCCTCAAAGCCTACAACTCCTTGTTTCACCGCACCGATTTCAAGCTCGCCACGTGTCATCACCCACTAAACGACAAAGTTGCCCAAGAGTGTGGCTTCACTTCTCTCTCTATTCGGATTGTGGATGAACTTGTTACTCTCAGTTCTCATCCACTGTTAAAAGCGCCTGATATCTCCAATGCTGGAAGCCATCTATCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCAACAACGAGAGTCCAGAAAACGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGGATTGGGAAGTTTGACGTGCCAAATGTTGAGACTTTGGATCCAAAAGTTAGGCAGTACAGTGACTTGTCCTCGTGGATAGATGATAATGGTGACCGGTTGAAAGGAAAAAATATCTTCATGTATTGTACTGGTGGAATTCGGTGTGAGATGGCATCAGCATATATTAAGTCTAAAGGTGCCGGTTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTATTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGTACCTGCCTTATGTGTCAATGTTCATTTGATGATTACACTTCTCGCTGCCGGTGTGCTTATTGCAGAATGCTTGTTTTGGTTTGCCGTAGTTGCGAGAATGAATCTACCGCCTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGAGTCAGCACAGTTAATTGAAAATGGAGAATCAAAAACATCATTGTCAGGTGTCGAGTTCAACAACTTTTCTTCAGATACTATATGTTTACCTCGAGTGCCCAGGGGAGATGGTAAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTGGCGAAGAAACTAAAGAAAATCACTGAATTTGTTTTTATTGATGCTCCCCATGAATTGCCATTCATTTACCAAACCCCCATGTTTGAGCCCAATGTAAATTGTGCATCATCGTCATTACCATCTAGTCCTCCACCACCATTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGCAGTGGTGTTGACTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGTTGGATATGATATTTCACTATCACACTTGAAGAATGTGTTTTCCCAGGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTGATCTCTGCACTACAAGAAGAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAGGCCATGGAGTCTGGCCCTATCAAGTGTCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGATGGTGATTGTTCTGTGATTGTTGAGCATGATAGTGGTCATATAATTCCTACCAAGTCCCCTTACATTGATGAGATCAAGGATTTCCTTAATCGCTTTCTGTAG 1779 0.4317 MSEDKDKEQYGVLLYYNYAEISDLNHLLTFYHSNCTSLNLRGRVRLSTHGVNVTVGGNLSSLESHIEALKAYNSLFHRTDFKLATCHHPLNDKVAQECGFTSLSIRIVDELVTLSSHPLLKAPDISNAGSHLSALDFHSSLHNANNESPENGLVLLDARNLYETRIGKFDVPNVETLDPKVRQYSDLSSWIDDNGDRLKGKNIFMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLMCQCSFDDYTSRCRCAYCRMLVLVCRSCENESTAYVCELCQKQGKAESAQLIENGESKTSLSGVEFNNFSSDTICLPRVPRGDGKNASSFKGRTASLAKKLKKITEFVFIDAPHELPFIYQTPMFEPNVNCASSSLPSSPPPPLENCKKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTVGYDISLSHLKNVFSQEGPFDGILGFSQGAAMAALISALQEELKGEMDFKFVVLCSGFALRMKAMESGPIKCPSLHIFGNEHGKDRQIANQTSKELASLYDGDCSVIVEHDSGHIIPTKSPYIDEIKDFLNRFL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01979 592 Pfam Serine hydrolase (FSH1) 357 583 IPR005645 -
Viun7g01979 592 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 126 263 IPR036873 -
Viun7g01979 592 Gene3D - 121 278 IPR036873 -
Viun7g01979 592 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Viun7g01979 592 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Viun7g01979 592 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Viun7g01979 592 SMART rhod_4 139 246 IPR001763 -
Viun7g01979 592 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Viun7g01979 592 FunFam esterase OVCA2 isoform X6 356 592 - -
Viun7g01979 592 Gene3D - 1 112 - -
Viun7g01979 592 Gene3D alpha/beta hydrolase 356 592 IPR029058 -
Viun7g01979 592 SUPERFAMILY alpha/beta-Hydrolases 440 592 IPR029058 -
Viun7g01979 592 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 591 IPR020936 -
Viun7g01979 592 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01979 Viun-Chr7 24813475 24818938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01979 5 592 Sulfurtransferasese or Rhodanese AT1G09280 63.007 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01979 - - gmx:100786152 1044.26