Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01966 ATGGCCGGTAATGGGACCCATTCAGATTCAAAAGCTGCAACAATTGTCATTAAAGATCTCAAATTTACATACCCCGGCATCGACGGCCACCCGCCGCCGGGTTCCTCACCGCTCATTCAAGACTTTTCTCTCACTCTCGGTTCCGCCGACCGCTGCCTTCTCGTCGGTTCCAATGGCGCCGGGAAAACCACGATCCTGAAGATACTGGGTGGGAAGCACTTGGTGGAACCTGACATGGTTCGCGTGCTTGGAAGATCAGCTTTTCACGACACCACTTTGGTGTCTTCTGGTGATCTCTGTTATCTCGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGGTTTGATGTGCCAATACAGATGGACGTTTCTGCTGAAAAAATGATATTTGGTGTGGCTGGGATTGATCCTCAAAGAAGAGCGGAGCTCATCAAGGTATTGGATATTGATCTTTCATGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTACAAATTTGTATGGGTCTTCTCAAACCGTTCAAGGTTCTTCTTCTTGATGAGATAACTGTTGACCTTGATGTTCTAGCAAGAGCTGATCTTCTTAGATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACCATTATCTATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACACATATTGTTTATGTAGCCCATGGAAAGCTGCAACTAGCAATGCCTATGGAGAAAGTCAAAGAAATTAGCAAATTGTCACTGATGAGAACAGTAGAAAGTTGGCTGCGGAAGGAGCGAGATGAAGATAGAAGGAAAAGAAAAGAAAGAAAAGCAGCTGGTCTTCCTGAATTTGGAAAGCAAGTTGAGGGAAGCCGTGTAACAGGGGATCCTGCACGTGCTGCAGTTCGAGTAACTAACAATGGCTGGGCAGCAGGACGATTAAATTCCACCGTTGCTGGTGAGGAAAACTTTATCCTCAGCTCTAATCGAGTACTGAGGTAG 999 0.4605 MAGNGTHSDSKAATIVIKDLKFTYPGIDGHPPPGSSPLIQDFSLTLGSADRCLLVGSNGAGKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFDVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAMPMEKVKEISKLSLMRTVESWLRKERDEDRRKRKERKAAGLPEFGKQVEGSRVTGDPARAAVRVTNNGWAAGRLNSTVAGEENFILSSNRVLR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01966 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 250 IPR027417 -
Viun7g01966 332 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Viun7g01966 332 Gene3D - 12 279 IPR027417 -
Viun7g01966 332 Pfam ABC transporter 40 185 IPR003439 GO:0005524
Viun7g01966 332 SMART AAA_5 48 235 IPR003593 GO:0016887
Viun7g01966 332 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 13 261 - -
Viun7g01966 332 MobiDBLite consensus disorder prediction 264 281 - -
Viun7g01966 332 MobiDBLite consensus disorder prediction 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01966 Viun-Chr7 24749115 24751607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01966 17 212 Calmodulin-binding Proteins AT2G36910 21.154 4.96e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01966 K12608 - gmx:100782386 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01966 7 24749115 24751607 Viun7g01966 7 24749115 24751607 ECH