Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01948 ATGGGCGGAGGCGGAGCGGCGATGGCGATGGCGCTTGCGGAGGCACAGTACTCGTTGGCCAAGACGTCGGTTTGGTGGGACATAGAGAACTGCCAAGTGCCGAAAGGGTGCGATCCCCACGCCATCGCGCAGAACATAAGCTCCGCCCTCGTTCGGATGAATTATTGCGGCCCCGTTTCCATCTCTGCTTACGGGGACACCACTGGCATCACTGCCTCCGTCCAGCATGCGCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCCGGTGTTAAAGATGCAAGTGATAAAAAGATTCTTGTTGACATGCTGTTCTGGGCGGTGGACAATCCTGCACCTGCTAATTACTTATTAATATCTGGTGATAGAGACTTCTCCAATGCTCTTCATCAGTTGCGGTTGAGGAGGTATAATATTCTTCTTGCACAACCACAGAAAGCTTCTGCACCCCTGGTAGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCTCCCCTTACGAATGGTGAATCACAAGTTGGTAATAATGACATCCAATTGTCTTCTGATACGGTACAAAGTCCTGTCCATAATTCCTTTCAGATACCACAGTATGTGGAATCCCATTCAGAAGTTCATACAGGAAATCAGAAATTTCCTGGTACAGGAAGGCAACTTGATTCTAGACATCATGGGAAGACGAATTGGAGAAATTCAAGTAAACCAAATGGACACAAGGTCATGAATCCAGCTCCAGTTGGACTTCAAGAAAATTATGGCTATATAAATTCTTCTCGACCTGGGAACTATACCCATAGTGTTCCAAGTGGTTCTACACCAAATTTTACCCATAATGTTCCCCCAAGTGGTTCTTCACCAAATTTTACCCATAATGTTCCCCCAAGTGGTTCTACAACAAATTTTACCCATAATGTTCCCCTAAGTGGTTCTACAACAAATTTTACCCATAATGTTCCCCCAAGTGGTTCTACACCAAATTTTACCCATAATGTTCCCCCAAGTGGTTCTGCTCCTAATTTTACTCGTGGCAAGTCTGATCAAATGCGCGGCAATAATGGTAATCTACAAGGCAATCATCAAAATCCACATTCACAGGCATTAAGATCAAATTCTTTTCCTATGCAGCCTCCTTTTGCACCAAGCAGTTCATTTTCCCCAAATTCCCAAACTTTTGCAACTTCAGTAGTGCCACCTAGGACTGGTGGGCCAAGCTTCTCTGCAGCACCACTTACAAAGGTGCCAGATATTGGTAATATTTCTGGATATCCTAGTAACGCTCACGATTCACACCCTGTTAAACATTTGAACGGGGACTTGAGACGGAGTTCTTACACTAATTCTTCAAATCCTATTAAGTTGATTGATGAACCAAATGGGCACATGATACAGAATGCACAACATTTGTATAATGGCCATCCACATGGTCCAGAACACCAACCTACATCATCGGCAACTGTGGGTAATAATAATCTTCCTGGTAACGGTATGTGGGGATCACCAGGATTTCCTAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACACTAAAAACTGAACAAATTATACCAACTGAGTCAAATATAACGGATTGTATTCGATGTGGAGATCCCAAGCATCGCAATACAGATGTCAAGAAGGCTCTGGAGAGTGCAGTTGAGCAGCAGATGGTAGTGAAGCAGAAAGTAGGTGCTTTGCAGTTGTTTGTCGGTAAGAATGATAAAGTTTGGAAGTGCGTAAACCCAATAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACATGGAATGAAATTAAAAAATTTCTATCTACTTCTTCGGGAAGATTAGCAATAATGAGTACGCAGTGCAAGTACGAAGCAGGTATTGTGATTAAGAATATGTGCTTGAAAAATCATGCTTTGGGCGATGTCCTACAGATTTTGAACATAGCGATTACCGTTAAAAAATGGATTGTGCATCAACAATTGGGCTGGCAACCACTTAAAATCACCCTTACTGAGGTCAATTCTGATTCAGAGGTCGTATCATGCCAATAA 2073 0.438 MGGGGAAMAMALAEAQYSLAKTSVWWDIENCQVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTGITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQVGNNDIQLSSDTVQSPVHNSFQIPQYVESHSEVHTGNQKFPGTGRQLDSRHHGKTNWRNSSKPNGHKVMNPAPVGLQENYGYINSSRPGNYTHSVPSGSTPNFTHNVPPSGSSPNFTHNVPPSGSTTNFTHNVPLSGSTTNFTHNVPPSGSTPNFTHNVPPSGSAPNFTRGKSDQMRGNNGNLQGNHQNPHSQALRSNSFPMQPPFAPSSSFSPNSQTFATSVVPPRTGGPSFSAAPLTKVPDIGNISGYPSNAHDSHPVKHLNGDLRRSSYTNSSNPIKLIDEPNGHMIQNAQHLYNGHPHGPEHQPTSSATVGNNNLPGNGMWGSPGFPKPSEYVQGLIGVVLLALNTLKTEQIIPTESNITDCIRCGDPKHRNTDVKKALESAVEQQMVVKQKVGALQLFVGKNDKVWKCVNPIGGNPKKHSKETWNEIKKFLSTSSGRLAIMSTQCKYEAGIVIKNMCLKNHALGDVLQILNIAITVKKWIVHQQLGWQPLKITLTEVNSDSEVVSCQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01948 690 Gene3D - 16 164 - -
Viun7g01948 690 MobiDBLite consensus disorder prediction 425 449 - -
Viun7g01948 690 MobiDBLite consensus disorder prediction 260 406 - -
Viun7g01948 690 Pfam NYN domain 21 157 IPR021139 GO:0004540
Viun7g01948 690 MobiDBLite consensus disorder prediction 212 245 - -
Viun7g01948 690 CDD PIN_limkain_b1_N_like 21 145 - -
Viun7g01948 690 PANTHER LIMKAIN B LKAP 17 571 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01948 Viun-Chr7 24626317 24630735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01948 10 179 C2H2 Transcription Factor Family AT5G61190 75.882 9.16e-83 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01948 - - vun:114190683 1384.78