Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01947 ATGAAAATGAGAAATACTATGTCCCACATCGAAGGCGGAGCGGGGATGGCGCTTGCGGAGGCACAGTACTCGTTGGCCAAAACGTCGGTTTGGTGGGACATAGAGAACTGCCAAGTGCCGAAAGGGTGTGATCCCTACGCCATCGCGCAGAACATAAGCTCCGCCCTCATTCGGATGAATTATTGCGGCCCCGTTTCTATCTCTGCTTACGGCGACACCACTGGCATCACTGCCTCCGTCCAGCATGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGTGTTAAAGATGCAAGTGATAAAAAGATTCTTGTTGACATGCTGTTCTGGGCGGTGGACAATCCTGCACCTGCTAATTACTTATTAATATCTGGTGATAGAGACTTCTCCAATGCTCTTCATCAGTTGCGGTTGAGGAGGTATAATATTCTTCTTGCACAACCACAGAAAGCTTCTGCACCCCTGGTAGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCTCCCCTTACGAAAGGTGAATCACAAGTTGGTAATAATGACATCCAATCGTCTCCTGATTCGGTACAAAGTCCAGTCCATAATGCCTTTCAGATACCACAGTATGTGGAATCCCATTCAGAAGTTCATACAGGAAATCAGAATAAGCCTGGTAGACGTCATGGGAAGACGAATGGGAGAAAGTCAAATAAAGCAAATGGACCCAAGGTCATCGAGGCTCCAGTTGGATTTCAAGAAAATTATGAGAATATAAATATTTCTCCACCCGGCAATTATACCCATAATGTTCCCCCAGGTGGTTCTACACCAAATTTTATTTGTGGCAATCCTGATCAAATTTGGCTCAATAATGGTAATCTACAAGGCAATCATGAAAATCCACTTTCACAACCATTAAGATCAAATAATTTTCCTTTGGAGCCTCCATTTTCACTAAGCAAAACATTTTCTCTAAATTCACCAAGTTTTGCAACTTCAGTAGTGCCGCCTTGGACTGGTGGGCCCAGCTTCTCTGCAGGACCAGATATTGGTAATATTTCTGGATATCTTAGTAATGCTCATGATCCGTACCCTGTTAATCAATTGAACGGGGACTTGAAATGGAGTTCTTACAGTAATTCTCCAAATCCTGTTAAATCTATTGATGAACCAAATGGGAAGATGACACAGAACACACAAAATTTGTATAATGGCCATGCACATGGTCCAGAACACCAACCTTCATCATCAGCAACTGTGGGTGATAATAATCTTCCTGATAATGGTACGTGGGGATCTTCAGAAACTCCTGAATCTTCTGAGTACGTCCAAGATCTTATAGGGGTTGTTTTACTTGCCTTGGACACACTGAAAACTGAAAAAATTAAGCCAACTGAGTCAAATATAACAGATTGTATTCGATTTGGAGATCCCAAGCATCGCAATACAGATGTCAAGAAGGCTCTGGAGATGGCTGTTGAGCAGCAGATGGTAGTGGCGCAGAATGTAGGTGCTTTGCAGTTGTTTGTTGGTAAGAATGATCAAGTTTGGAAGTGTGTATGCACTCTAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACGTGGAAAAAAATTAAAAAATTTCTAGCTACTTCTCCTGGAAGATTGGCAATAATGAATACTCAGTGCAAGTACGAAGCAGGTATTGTGATTAAGAATATGTGCTTGAAAGATCATGCTTTGGGTGATGTCCTACAGATTTTGAGTTTGGCGATTTCCTATAAAAAATGGATTGTGCATCAACAATTGGGCTGGCAACCAGTTAACATCACCCTAGCAGAGAAATCTGATTCAGAGGTCATAGCATGCGAATAA 1857 0.4319 MKMRNTMSHIEGGAGMALAEAQYSLAKTSVWWDIENCQVPKGCDPYAIAQNISSALIRMNYCGPVSISAYGDTTGITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTKGESQVGNNDIQSSPDSVQSPVHNAFQIPQYVESHSEVHTGNQNKPGRRHGKTNGRKSNKANGPKVIEAPVGFQENYENINISPPGNYTHNVPPGGSTPNFICGNPDQIWLNNGNLQGNHENPLSQPLRSNNFPLEPPFSLSKTFSLNSPSFATSVVPPWTGGPSFSAGPDIGNISGYLSNAHDPYPVNQLNGDLKWSSYSNSPNPVKSIDEPNGKMTQNTQNLYNGHAHGPEHQPSSSATVGDNNLPDNGTWGSSETPESSEYVQDLIGVVLLALDTLKTEKIKPTESNITDCIRFGDPKHRNTDVKKALEMAVEQQMVVAQNVGALQLFVGKNDQVWKCVCTLGGNPKKHSKETWKKIKKFLATSPGRLAIMNTQCKYEAGIVIKNMCLKDHALGDVLQILSLAISYKKWIVHQQLGWQPVNITLAEKSDSEVIACE 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01947 618 Gene3D - 22 170 - -
Viun7g01947 618 PANTHER LIMKAIN B LKAP 23 499 IPR024768 GO:0005777|GO:0010468
Viun7g01947 618 MobiDBLite consensus disorder prediction 378 439 - -
Viun7g01947 618 MobiDBLite consensus disorder prediction 211 244 - -
Viun7g01947 618 MobiDBLite consensus disorder prediction 181 199 - -
Viun7g01947 618 Pfam NYN domain 27 163 IPR021139 GO:0004540
Viun7g01947 618 MobiDBLite consensus disorder prediction 179 199 - -
Viun7g01947 618 Pfam OST-HTH Associated domain 554 611 IPR025677 -
Viun7g01947 618 CDD PIN_limkain_b1_N_like 27 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01947 Viun-Chr7 24618597 24622705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01947 16 185 C2H2 Transcription Factor Family AT5G61190 75.294 3.32e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01947 - - vun:114190919 1276.92