Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01903 ATGAAGATGATGAGAATGAAGCTGCTTTTGGTAGCCGTTGAAGTTGCATGCTTGGTTTCTGGGATCTTCTCCTTTGGATCTCAGACACTGTCTCAGCTTTCTTTCTTAGAAAACGGTGTCGTCTCCACTCGCCCTTCCTCAACTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGAAGCTCTTTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTGTTCATTTAGAGGGGGGAGGATGGTGTGATACCATCAGAAATTGTGTCTATAGGAAACATACTCGTCGTGGTTCCTCAAAATTCATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTACTGTGATGGGGCGTCTTTCAGTGGAGATGCTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCGAAAGGAATGCAGAAAGCCAACCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCAGGAGCTTATTTCCAGAATCTTCCAAAGTCAAATGTTTGAGTGATGCAGGTTTCTTTCTTGATGCAATTGATGTATCTGGGGGACGCACACTGAGGAATCTCTTTGGAGGTGTGGTTCAGTTACAGGATGTACAAAAAAATCTTCCAAAAAGTTGTCTCAATCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGATCGATCATATTGAAACCCCATTGTTTCTACTCAACACAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCACCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTACAGACTTCTCAAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAAAGACAAGAGACATGGTTTGCAGATGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTAGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1263 0.4283 MKMMRMKLLLVAVEVACLVSGIFSFGSQTLSQLSFLENGVVSTRPSSTQPQPLMVDLTLIQEALSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWCDTIRNCVYRKHTRRGSSKFMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDAEDESAQLQFRGQKIWLAAMEELMSKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQDVQKNLPKSCLNQLDPTSCFFPQNLIDHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDITDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01903 420 PANTHER NOTUM-RELATED 18 414 IPR004963 GO:0016787
Viun7g01903 420 Pfam Pectinacetylesterase 49 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01903 Viun-Chr7 24190363 24197352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01903 4 419 Carbohydrate Esterase AT3G62060 65.574 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01903 K19882 - gmx:100786972 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02937 1 38157161 38160786 Viun7g01903 7 24190363 24197352 ECH
Viun7g01903 7 24190363 24197352 Viun1g02937 1 38157161 38160786 ECH
Viun7g01903 7 24190363 24197352 Viun7g01903 7 24190363 24197352 ECH
Viun3g05531 3 61155915 61160267 Viun7g01903 7 24190363 24197352 ECH
Viun1g02906 1 37966622 37971088 Viun7g01903 7 24190363 24197352 PCT