Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01902 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTTCGGAAGGGTCTTTGGTCTCCTGAGGAGGATGAAAAACTTCTGAGGCATATTACAAAGTATGGTCATGGATGTTGGAGTTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACCTTAGACCTGATTTAAAGAGAGGAACATTCTCACAGGAGGAAGAAAACCTTATCATTGAACTTCATGCAGTATTGGGGAACAGGTGGTCTCAAATTGCGGCACAGTTGCCGGGGAGGACTGATAATGAAATAAAGAATCTGTGGAACTCTTGCCTGAAGAAGAAACTGAGGCAAAAAGGCATAGACCCTGTCACACATAAACCACTGTCCGAGGTTGAGAATGGAGATGAAACTGGTAAGAGCCAAGGTAAAGCACCGGAAGTGTCCAATGAATTGAACCTCCTGAAATCAGAGAGCTCCAAGTCAGATTCAGCTTCCTATGAGCAGAGAACATCAATTTCTCCGAAAGCCTATGCACCCGAGATGGATGGTTCCTGCAGCTCCAAGATTTACTGCAGAAGTGACAGCAATTTCGTAACCAACAACTGTTACAACAAAGACTTGTTCCTGGAGAGGTTTATGAATAGTAGCCGCCAAGAGAGCTACAACAGTAGTTGCCAGCCCTCAGATTTGATGGGAAATTTTCCAATTCAGATGAGTTATGCAACCAATGAGTGTCTCCCTAATGATTCAAACTCTAGTCATTGGTTCGGCCAAACTGGAAGGCCTTTCGATATGAACTCTGAATTTCCTTTCAATGCTGCCACTTCTATTAATCATCCTACACCTACAACCAATTTGTTTCTTCCTAATTCTTTTTGCTACAAGCCTTCACTTGCTGTTCCTTCTGACAGCGTTTCAACAGCCTATGGATCTCATTACTGGGAAGGCAGTGCCTCCAACAATAGCAATAGCAGCATTAGGAGTAATAGCAGCACTGAGTTGAGAGGTAGCAGCCCCTTGAACATCTTTTCTTCTTGGGGATTGGCAGAATGTAGCACCTCTACTACTAAAGAGGGACAAATTCATATGATGGAGAATCATACAGAAGAAGCTAAGTGGGACGAGTACCTTCACAACAACACAATCTCAATGCTGGCTTCTGTACAAAATCAAGCTCCTGAATCCTTATGCAACCAGATAAAAACATCCATGCATTTGGTACCTGATACTTTAGGGGCTATGTTACCTCATAGCACCAAGCAGCAAGAACCCTCTCAAACCTCTAGTATCTTTTCCAAGGACATCCAGAAGCTCAGGGCAGCCTTTGGACACATGTAA 1341 0.4385 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVENGDETGKSQGKAPEVSNELNLLKSESSKSDSASYEQRTSISPKAYAPEMDGSCSSKIYCRSDSNFVTNNCYNKDLFLERFMNSSRQESYNSSCQPSDLMGNFPIQMSYATNECLPNDSNSSHWFGQTGRPFDMNSEFPFNAATSINHPTPTTNLFLPNSFCYKPSLAVPSDSVSTAYGSHYWEGSASNNSNSSIRSNSSTELRGSSPLNIFSSWGLAECSTSTTKEGQIHMMENHTEEAKWDEYLHNNTISMLASVQNQAPESLCNQIKTSMHLVPDTLGAMLPHSTKQQEPSQTSSIFSKDIQKLRAAFGHM 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01902 446 MobiDBLite consensus disorder prediction 123 140 - -
Viun7g01902 446 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Viun7g01902 446 SMART sant 13 63 IPR001005 -
Viun7g01902 446 SMART sant 66 114 IPR001005 -
Viun7g01902 446 Gene3D - 68 140 - -
Viun7g01902 446 PANTHER MYB DOMAIN PROTEIN 55 1 359 - -
Viun7g01902 446 FunFam Myb transcription factor 11 67 - -
Viun7g01902 446 CDD SANT 17 61 IPR001005 -
Viun7g01902 446 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Viun7g01902 446 FunFam MYB transcription factor 68 140 - -
Viun7g01902 446 Gene3D - 11 67 - -
Viun7g01902 446 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Viun7g01902 446 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Viun7g01902 446 CDD SANT 69 109 IPR001005 -
Viun7g01902 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Viun7g01902 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Viun7g01902 446 MobiDBLite consensus disorder prediction 123 149 - -
Viun7g01902 446 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01902 Viun-Chr7 24180908 24183155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01902 1 137 MYB Transcription Factor Family AT4G01680 91.971 2.58e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun7g01902 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01902 K09422 - gmx:100782199 752.666