Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01896 ATGGAAAACCACCACCAAATGCAACAACACCGTCGTCAAATTGGATCCACCAGTCTCGATCTAGATCCTACAACCGTCAACGCCGTCAAAGAACTCGATTTTTTCTCCTCAACTTCACCGTCCAACAACACTCATACTCATAACTCAGATACTCGTCTTAACCTCCACCATCTCCGTTCAAACATTCCTAAAGAGAACGAATCACAGCCTCTTCTCACTCATCAGTTCGTAAATACTACGCTGAATTTAATGTGTCCGAGTCAGAGTGACGAATTGTCAAGATCAGCAGCAGCAATTGATCAAAATCTTAAATCTCCGCTGAATACGCTCCAAAACGAGTTTCTGAGACTACAAGAAGAGAATTACAGGTTGAGAACTATGTTGGACCAAATCACCAAAAACTACCACCATCTTCAAATTTTCATTGCTATGCAGAAGCAAAAGCCGTATCAGAAGGTGGAGAGAAATGAGATGATATCTGGTCATCATTTACTGGACCCACAATCATGCACCAGATTGGACGCTAAAGTTGTTGCATCAGTCTCCGATGATAAATCTAGTCAAGAGGCTCATGCTGATCGTGTAGAAGATGTTATTGAACAAGCATCATCCAAGAGTCCCAAGTTTGAAGAATCTAAGCCCGGTGAGCCTCCTTTAAGAAGAACCAGAGTTTCCGTGCGTGCAAGATCAGAAGCTCCAGTGATCTGCGATGGATGTCAATGGAGGAAATATGGGCAAAAAATATCCAAGGGTAATCCATGTCCTCGTGCCTACTATCGTTGCACCATGGCACTAGGATGCCCCGTTCGTAAACAGGTGCAAAGATGCACAGAGGACAAGAGTGTGTTGATAACAACTTACGAAGGAAATCATAACCACCCTCTTCCACCTTCAGCCACGGTGATGGCGAATTCTACCTCAGCAGCTGCAGCTATGTTGTTATCTTCTTCGGGTTCAACAACTAGTAACCAAGCACTAAACAACAGTGTTGGAGTATTCTCTTCCATGTACCTCTCAGCCTCTGCACCATTTCCCACCATCACCCTTGACATGACCAACAACCCTGTGCTAGGGCACCCTATCATCTTCCCTCCCAAAATGCAACATTCACTAGGGCAAAAACAACCTTTGACAGATATCGTGACCGCCGCTGTTGCTTCGAATCCAAATTTCACTGTCGCGTTAGCAGCAGCTATCTCGTCGATTATTGGAGCTCCTAGAAGCAATGATGGTGGAAATAATATCTACAGTAACAATGGTGGAAACGTTGTTGCTGTTGGGACATCTATGTTGCCTGGACCCACTTAA 1308 0.445 MENHHQMQQHRRQIGSTSLDLDPTTVNAVKELDFFSSTSPSNNTHTHNSDTRLNLHHLRSNIPKENESQPLLTHQFVNTTLNLMCPSQSDELSRSAAAIDQNLKSPLNTLQNEFLRLQEENYRLRTMLDQITKNYHHLQIFIAMQKQKPYQKVERNEMISGHHLLDPQSCTRLDAKVVASVSDDKSSQEAHADRVEDVIEQASSKSPKFEESKPGEPPLRRTRVSVRARSEAPVICDGCQWRKYGQKISKGNPCPRAYYRCTMALGCPVRKQVQRCTEDKSVLITTYEGNHNHPLPPSATVMANSTSAAAAMLLSSSGSTTSNQALNNSVGVFSSMYLSASAPFPTITLDMTNNPVLGHPIIFPPKMQHSLGQKQPLTDIVTAAVASNPNFTVALAAAISSIIGAPRSNDGGNNIYSNNGGNVVAVGTSMLPGPT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01896 435 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01896 435 MobiDBLite consensus disorder prediction 181 225 - -
Viun7g01896 435 FunFam probable WRKY transcription factor 31 220 297 - -
Viun7g01896 435 MobiDBLite consensus disorder prediction 1 20 - -
Viun7g01896 435 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 410 IPR044810 GO:0003700
Viun7g01896 435 SMART WRKY_cls 235 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01896 435 SUPERFAMILY WRKY DNA-binding domain 229 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01896 435 Gene3D WRKY domain 220 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01896 435 Pfam WRKY DNA -binding domain 237 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01896 435 MobiDBLite consensus disorder prediction 186 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01896 Viun-Chr7 24103387 24106184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01896 110 403 WRKY Transcription Factor Family AT4G04450 41.117 4.67e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g01896 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01896 - - vun:114192179 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01896 7 24103387 24106184 Viun7g01896 7 24103387 24106184 ECH
Viun1g02899 1 37883562 37886955 Viun7g01896 7 24103387 24106184 PCT