Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01895 ATGGAAAACCACCACCAAATGCAACAACACCGTCGTCAAATTGGATCCACCAGTCTCGATCTAGATCCTACAACCGTCAACGCCGTCAAAGAACTCGATTTTTTCTCCTCAACTTCACCGTCCAACAACACTCATACTCATAACTCAGATACTCGTCTTAACCTCCACCATCTCCGTTCAAACATTCCTAAAGAGAACGAATCACAGCCTCTTCTCACTCATCAGTTCGTAAATACTACGCTGAATTTAATGTGTCCGAGTCAGAGTGACGAATTGTCAAGATCAGCAGCAGCAATTGATCAAAATCTTAAATCTCCGCTGAATACGCTCCAAAACGAGTTTCTGAGACTACAAGAAGAGAATTACAGGTTGAGAACTATGTTGGACCAAATCACCAAAAACTACCACCATCTTCAAATTTTCATTGCTATGCAGAAGCAAAAGCCGTATCAGGTGGAGAGAAATGAGATGATATCTGGTCATCATTTACTGGACCCACAATCATGCACCAGATTGGACGCTAAAGTTGTTGCATCAGTCTCCGATGATAAATCTAGTCAAGAGGCTCATGCTGATCGTGTAGAAGATGTTATTGAACAAGCATCATCCAAGAGTCCCAAGTTTGAAGAATCTAAGCCCGGTGAGCCTCCTTTAAGAAGAACCAGAGTTTCCGTGCGTGCAAGATCAGAAGCTCCAGTGATCTGCGATGGATGTCAATGGAGGAAATATGGGCAAAAAATATCCAAGGGTAATCCATGTCCTCGTGCCTACTATCGTTGCACCATGGCACTAGGATGCCCCGTTCGTAAACAGGTGCAAAGATGCACAGAGGACAAGAGTGTGTTGATAACAACTTACGAAGGAAATCATAACCACCCTCTTCCACCTTCAGCCACGGTGATGGCGAATTCTACCTCAGCAGCTGCAGCTATGTTGTTATCTTCTTCGGGTTCAACAACTAGTAACCAAGCACTAAACAACAGTGTTGGAGTATTCTCTTCCATGTACCTCTCAGCCTCTGCACCATTTCCCACCATCACCCTTGACATGACCAACAACCCTGTGCTAGGGCACCCTATCATCTTCCCTCCCAAAATGCAACATTCACTAGGGCAAAAACAACCTTTGACAGATATCGTGACCGCCGCTGTTGCTTCGAATCCAAATTTCACTGTCGCGTTAGCAGCAGCTATCTCGTCGATTATTGGAGCTCCTAGAAGCAATGATGGTGGAAATAATATCTACAGTAACAATGGTGGAAACGTTGTTGCTGTTGGGACATCTATGTTGCCTGGACCCACTTAA 1305 0.4452 MENHHQMQQHRRQIGSTSLDLDPTTVNAVKELDFFSSTSPSNNTHTHNSDTRLNLHHLRSNIPKENESQPLLTHQFVNTTLNLMCPSQSDELSRSAAAIDQNLKSPLNTLQNEFLRLQEENYRLRTMLDQITKNYHHLQIFIAMQKQKPYQVERNEMISGHHLLDPQSCTRLDAKVVASVSDDKSSQEAHADRVEDVIEQASSKSPKFEESKPGEPPLRRTRVSVRARSEAPVICDGCQWRKYGQKISKGNPCPRAYYRCTMALGCPVRKQVQRCTEDKSVLITTYEGNHNHPLPPSATVMANSTSAAAAMLLSSSGSTTSNQALNNSVGVFSSMYLSASAPFPTITLDMTNNPVLGHPIIFPPKMQHSLGQKQPLTDIVTAAVASNPNFTVALAAAISSIIGAPRSNDGGNNIYSNNGGNVVAVGTSMLPGPT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01895 434 Gene3D WRKY domain 219 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01895 434 MobiDBLite consensus disorder prediction 1 20 - -
Viun7g01895 434 FunFam probable WRKY transcription factor 31 219 296 - -
Viun7g01895 434 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 409 IPR044810 GO:0003700
Viun7g01895 434 ProSiteProfiles WRKY domain profile. 229 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01895 434 MobiDBLite consensus disorder prediction 185 224 - -
Viun7g01895 434 SUPERFAMILY WRKY DNA-binding domain 228 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01895 434 MobiDBLite consensus disorder prediction 180 224 - -
Viun7g01895 434 SMART WRKY_cls 234 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01895 434 Pfam WRKY DNA -binding domain 236 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01895 Viun-Chr7 24103387 24106184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01895 110 402 WRKY Transcription Factor Family AT4G04450 41.117 5.62e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g01895 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01895 - - vun:114192179 788.104