Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01827 ATGGAGAAGAAGGAGATGGTTGTGAAGACTGAGGATGCTGTTGGGTCCTCTTCTTTCCCTTGTTATAATTCAAACGTTTATCCATTCTCGAACGCCTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTACAGTCCTCTGCTTGAGTTGCCTCAACTTTCCACCGTTTCTGCGCCTCATCACTCCACAGTTAAGGCTCCATCTGATAACGGAAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCCAACTCTTCTTCCATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAATAAGACCCTAGACCAAGTTGAAGAAGATGACGACGAAGAAGAAGAAGGACAACACAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGCTACTATCGTTGCACCAGTGTCTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTACGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCGGGTGTCCCCGCGGGATACGCTACCAACTTTGCTTCAGTTTTTCCACAACCAGGAAACTACTTATCCCAGTATCAGCAGCAGCAGCAGCACCAACATCAACAACAACTTATTTTCAACACATTGTCCTCTTTGGGCTTCCCTTACAACGATTCTTCCACTGCAAAGAACGCGGGTTTTACTCAAGAGAGACGGCTTTGTAATCCGGGGACGAATGCATTTCTAAGAGACCATGGACTTCTTCAAGATGTTGTTCCCTCGCACATGTTGAAAGAAGAGTAG 963 0.4683 MEKKEMVVKTEDAVGSSSFPCYNSNVYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSAPHHSTVKAPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLDQVEEDDDEEEEGQHKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVPAGYATNFASVFPQPGNYLSQYQQQQQHQHQQQLIFNTLSSLGFPYNDSSTAKNAGFTQERRLCNPGTNAFLRDHGLLQDVVPSHMLKEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01827 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 261 IPR044810 GO:0003700
Viun7g01827 320 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01827 320 MobiDBLite consensus disorder prediction 84 112 - -
Viun7g01827 320 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01827 320 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01827 320 PIRSF WRKY_txn_fact_IIc 1 320 IPR017396 GO:0003700
Viun7g01827 320 MobiDBLite consensus disorder prediction 69 151 - -
Viun7g01827 320 FunFam WRKY transcription factor 57 149 223 - -
Viun7g01827 320 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01827 320 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01827 Viun-Chr7 23430167 23432291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01827 34 320 WRKY Transcription Factor Family AT2G47260 49.383 9.43e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g01827 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01827 - - gmx:100784158 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01827 7 23430167 23432291 Viun7g01827 7 23430167 23432291 ECH
Viun1g02841 1 37532523 37534338 Viun7g01827 7 23430167 23432291 PCT