Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01811 ATGGGAAGGGGTCCTTTTTCCTTCACACCTTTCAAATCCAACGAATTCCATGGCGGTTATGGCTCTATACAAGGAGAGGATGTTGTGCTCCAAAGGGAGCACACTTTCTCTTCAACAATGGAGTTAAATACTCACGAAGATCAATCTCAAAAGCAGCAACGTAGTTTCGATTTTGATCACGTGACGTCTGAGGAGTTCAACTTCGAATCTGTTCAGCCACCAAAGAAGTTTTCTTTTCAAGAAACTAAGGGACAAAAGGATAAACAAGTTCTGCCATCTTCTTTAGCATCACTAGAGCTCCTGAGCAATTATGGAAGAAGGTTCAATAAGATAGGGACGCAAAACATCAGGTGTAGTGTTGAAACTTGCTTCAGTCCTCAGAAGTTATCAACTGAAGAAATAATAAGAGTGGCCGGAGCAAGGTATCTTCAACACTCTACACAGTGGCACCATGATCTTTGCATCCCCATGCACCCTTATGGAATGAGTCTTGGGGTTTTATCGGAAGAAGAAAATAGAGGCGTGGAGCTCGCTCAGTTTCTTCTGGCAGCTGCTGAGAGGGTAGGGTGCCAGCAATTTGAACGTGCCAGCATGCTACTTTCCCATTTGCTGTGGAACTCTTCAGGCGGTGGTGGAAGCCCCGTTGAGAGAGTTGTTTTTCATTTCTCTCAAGCACTTCTTGAAAGGATCAAAAGAGAAACGAGTGGAAAAGTGACACTGAACAAGTGTGTAAAAAACGAGGAAAGGGAAATGATTGAGAAGCTAAGATTGGATACTAACATGGCTCTTACGTGCCATGAAAAAATTCCTTTCAATCAAGTAATGCAGTTTGCTGGGGTGCAAGCCATAGTGGAACATGTGGCATTTCAAACCAGAATTCATCTCATAAACCTTGATATTGGGTGTGGGGTGCAATGCACAGCTTTGATGCAAGCACTGGCTGAGAGGCATGAAAGGCAAGTTGAGCTTCTGAAGATAACCGCCATTGGACTTCAAGGTAAAACCAGACTTGAAGAAACAGGGAAAAGGTTAGTGAGTTTTGCTGAATCCTTGAACTTGCCATTTTTATATAAGATAGTTTTTGTCAGAAGCATCACAGAGATCAAGGCTGAGCAATTTGGAATTGAGGATAATGAAGCTGTAGCTGTTTATTCTCCCTATATGCTGAGGACTATGGTGTCGGATTTTGTTTCTTTGGAACACCTGATGCGGGTGATGAGAAAAATCAGACCAACTATAATGATAGTTCTTGAGTTGGAAGCAAAGCACAATTCACCCTCCTTTGTGAATCGCTTCATTGAAGCATTGTTCTTCTACGCGGCATTTTTTGACTGCATTGACACCTGCATGAAGCAGGATTACGAGTGCAGAATGCGACTTGAGGGAATATTATCAGAAGGGATACGAAACATTGTTGCTATGGAAGATGGAGAAAGAAGGGTCAGGGATGTGAAGATAGATGTTTGGAGAAGATTCTTTGCAAGGTATAGTATGGTGGAGACTGCATTTAGCGAGTCATCATTGTACCAAGCTAACTTGGTTACCAAAAAATTTGAGTGTGGGAATTTCTGCACTGTGGAAAGAAACGGGAAATGCCTGATACTTGGATGGAAAGGAGCCACAATTCATTCAATCTCAGCTTGGAAGTTTCTTTAA 1656 0.4239 MGRGPFSFTPFKSNEFHGGYGSIQGEDVVLQREHTFSSTMELNTHEDQSQKQQRSFDFDHVTSEEFNFESVQPPKKFSFQETKGQKDKQVLPSSLASLELLSNYGRRFNKIGTQNIRCSVETCFSPQKLSTEEIIRVAGARYLQHSTQWHHDLCIPMHPYGMSLGVLSEEENRGVELAQFLLAAAERVGCQQFERASMLLSHLLWNSSGGGGSPVERVVFHFSQALLERIKRETSGKVTLNKCVKNEEREMIEKLRLDTNMALTCHEKIPFNQVMQFAGVQAIVEHVAFQTRIHLINLDIGCGVQCTALMQALAERHERQVELLKITAIGLQGKTRLEETGKRLVSFAESLNLPFLYKIVFVRSITEIKAEQFGIEDNEAVAVYSPYMLRTMVSDFVSLEHLMRVMRKIRPTIMIVLELEAKHNSPSFVNRFIEALFFYAAFFDCIDTCMKQDYECRMRLEGILSEGIRNIVAMEDGERRVRDVKIDVWRRFFARYSMVETAFSESSLYQANLVTKKFECGNFCTVERNGKCLILGWKGATIHSISAWKFL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01811 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 542 IPR005202 -
Viun7g01811 551 ProSiteProfiles GRAS family profile. 168 549 IPR005202 -
Viun7g01811 551 Pfam GRAS domain family 178 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01811 Viun-Chr7 23270781 23272436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01811 166 550 GRAS Transcription Factor Family AT3G03450 28.278 1.14e-44 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun7g01811 GRAS 6e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01811 - - gmx:100791952 610.527