Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01810 ATGGCGGAAGATCAGTCAGTTGTTGGAAGAAGAAGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACATGAGGAAGAAAAACATGAATTTTCCGAGGCTGAAGACCGTGTAATGTGGATGGCATTTGAGGAATATGGGTTAAATGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTCAGAAATTCAGGAGAGGTACAAAAGTATAAAGGAAAAGAACATTGGTATGTTGGATCAGCATTCGGAAAACCCAGGAGATTATGAATGTATTGGCATCTCTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTACAGATTTTTGATTGTCGTCTGCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACAGTATGGTGTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGAAGTTAAATGAAGTCAAAGGTGTGTCAACAGATGCAACTTCTGGGTCTGATCAAAATAAGAGAACTACAACTATGGAAGAGGCAGATGGGATATTGGCACCCTCCACTATAGAGGAACCTGGTAATCAGAGTACAGCACCTTTTGGAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTATCTCATTAAGTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACAGCACTTTGTGACTCAACAACCCCTCCTGATGGTTCTCAAAATTCTAATAAAAAACTGAAGACTATCTCAAATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTCTTGGGTGCATGTGATGAAAGTAAACATACTATTACTTGTGTAATTTTGGACAAATCTGATAAACATAATTCGAATAAATTAATAGACCCTTCTAGGACTTGCGATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACAAGTAAGATAGAATTTAAGTTGCCCAGCTCAATGGAAGGGAAAGTTGATGCGATGCCAGGCCTCTCAGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGATTAAAGACTTGCATGGAAATAGCTACTTACATGCATGCTGGAGGAGTGTCAATGTCCCACGGGTCTATCATTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACGGACCAGGAGATGCCATCTAGGTCACGATTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTACTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACGCCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGCGTTAATGGTGGAACATGCTGTGAAAAGTATTGCGGTTGTTCAAAAAGCTGCAAAAATCGATTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGTCCTTGTTTTGCTGCAGGACGGGAATGTGACCCAGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGAATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTATCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGACCGCGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAATACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAACTGCTACGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATAGATGCTAGCGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTGTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2184 0.4212 MAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEHEEEKHEFSEAEDRVMWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNIGMLDQHSENPGDYECIGISPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLVYPSEKQTVWCDPEGDKKPCSDQCYLQKLNEVKGVSTDATSGSDQNKRTTTMEEADGILAPSTIEEPGNQSTAPFGTEVDCHGSLNLNVPISLSVEKRKVTNLSDTALCDSTTPPDGSQNSNKKLKTISNDVITVNSDSSNNLLGACDESKHTITCVILDKSDKHNSNKLIDPSRTCDTDEQDKSIGDGPKDPTSKIEFKLPSSMEGKVDAMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIATYMHAGGVSMSHGSIIAPSSIMDDKGKFDAEYTDQEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVCQGRAKKHQSH 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01810 727 SUPERFAMILY SET domain 479 696 IPR046341 -
Viun7g01810 727 Coils Coil 25 45 - -
Viun7g01810 727 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 726 IPR045318 GO:0006338|GO:0042054
Viun7g01810 727 MobiDBLite consensus disorder prediction 706 720 - -
Viun7g01810 727 MobiDBLite consensus disorder prediction 313 340 - -
Viun7g01810 727 Pfam CXC domain 517 548 IPR041355 -
Viun7g01810 727 ProSiteProfiles CXC domain profile. 465 564 IPR026489 -
Viun7g01810 727 FunFam Putative histone-lysine N-methyltransferase EZH2 479 695 - -
Viun7g01810 727 ProSiteProfiles SET domain profile. 578 693 IPR001214 GO:0005515
Viun7g01810 727 SMART set_7 578 699 IPR001214 GO:0005515
Viun7g01810 727 MobiDBLite consensus disorder prediction 313 339 - -
Viun7g01810 727 Gene3D SET domain 479 695 IPR046341 -
Viun7g01810 727 SMART CXC_2 513 550 IPR033467 -
Viun7g01810 727 CDD SET_EZH 578 694 - -
Viun7g01810 727 MobiDBLite consensus disorder prediction 699 727 - -
Viun7g01810 727 Pfam SET domain 589 692 IPR001214 GO:0005515
Viun7g01810 727 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 727 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01810 Viun-Chr7 23254258 23264643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01810 567 696 C2H2 Transcription Factor Family AT2G23740 26.531 3.75e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g01810 SET 8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01810 - K11430 pvu:PHAVU_007G213900g 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01810 7 23254258 23264643 Viun7g01810 7 23254258 23264643 ECH
Viun1g02819 1 37411578 37427063 Viun7g01810 7 23254258 23264643 PCT