Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01808 ATGGTGTCAAAACCTACCGACTCCGTTTCCAAACCTCGAGTAAAACAACTTGGAGAGGCTGCAAATGATGTATTGGGAACCTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATGTCATACCTCAGGAGTCCTAAAGGCAATATCAACAAGGGGTTCTTCACAGGAGGAAAATAGGAAAACTCCAATTCTTTCTAGAATTGACCGTCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGTATTATCTGCTACAAGTATCAAAATACCATATATTGAAAGATTACCGCCGTATACCTCTTGGATATTTCTGGACAGAAATCAGAGAATGGCGGAAGATCAGTCAGTTGTTGGAAGAAGAAGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACATGAGGAAGAAAAACATGAATTTTCCGAGGCTGAAGACCGTGTAATGTGGATGGCATTTGAGGAATATGGGTTAAATGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTCAGAAATTCAGGAGAGGTACAAAAGTATAAAGGAAAAGAACATTGGTATGTTGGATCAGCATTCGGAAAACCCAGGAGATTATGAATGTATTGGCATCTCTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTAATTTTTGATTGTCGTCTGCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACAGTATGGTGTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGAAGTTAAATGAAGTCAAAGGTGTGTCAACAGATGCAACTTCTGGGTCTGATCAAAATAAGAGAACTACAACTATGGAAGAGGCAGATGGGATATTGGCACCCTCCACTATAGAGGAACCTGGTAATCAGAGTACAGCACCTTTTGGAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTATCTCATTAAGTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACAGCACTTTGTGACTCAACAACCCCTCCTGATGGTTCTCAAAATTCTAATAAAAAACTGAAGACTATCTCAAATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTCTTGGGTGCATGTGATGAAAGTAAACATACTATTACTTGTGTAATTTTGGACAAATCTGATAAACATAATTCGAATAAATTAATAGACCCTTCTAGGACTTGCGATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACAAGTAAGATAGAATTTAAGTTGCCCAGCTCAATGGAAGGGAAAGTTGATGCGATGCCAGGCCTCTCAGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGATTAAAGACTTGCATGGAAATAGCTACTTACATGCATGCTGGAGGAGTGTCAATGTCCCACGGGTCTATCATTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACGGACCAGGAGATGCCATCTAGGTCACGATTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTACTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACGCCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGCGTTAATGGTGGAACATGCTGTGAAAAGTATTGCGGTTGTTCAAAAAGCTGCAAAAATCGATTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGTCCTTGTTTTGCTGCAGGACGGGAATGTGACCCAGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGAATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTATCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGACCGCGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAATACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAACTGCTACGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATAGATGCTAGCGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTGTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2601 0.416 MVSKPTDSVSKPRVKQLGEAANDVLGTLSLKINQLKKQIQAERIVYIKEKIQSNEKKLQCHTSGVLKAISTRGSSQEENRKTPILSRIDRPLCKFSGFSPVSGDKDHSNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEHEEEKHEFSEAEDRVMWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNIGMLDQHSENPGDYECIGISPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLVYPSEKQTVWCDPEGDKKPCSDQCYLQKLNEVKGVSTDATSGSDQNKRTTTMEEADGILAPSTIEEPGNQSTAPFGTEVDCHGSLNLNVPISLSVEKRKVTNLSDTALCDSTTPPDGSQNSNKKLKTISNDVITVNSDSSNNLLGACDESKHTITCVILDKSDKHNSNKLIDPSRTCDTDEQDKSIGDGPKDPTSKIEFKLPSSMEGKVDAMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIATYMHAGGVSMSHGSIIAPSSIMDDKGKFDAEYTDQEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVCQGRAKKHQSH 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01808 866 SMART CXC_2 652 689 IPR033467 -
Viun7g01808 866 Gene3D SET domain 618 834 IPR046341 -
Viun7g01808 866 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 866 IPR025778 GO:0031519
Viun7g01808 866 SMART set_7 717 838 IPR001214 GO:0005515
Viun7g01808 866 MobiDBLite consensus disorder prediction 845 859 - -
Viun7g01808 866 Pfam CXC domain 656 687 IPR041355 -
Viun7g01808 866 MobiDBLite consensus disorder prediction 452 478 - -
Viun7g01808 866 Pfam SET domain 728 831 IPR001214 GO:0005515
Viun7g01808 866 SUPERFAMILY SET domain 618 835 IPR046341 -
Viun7g01808 866 FunFam Putative histone-lysine N-methyltransferase EZH2 618 834 - -
Viun7g01808 866 ProSiteProfiles CXC domain profile. 604 703 IPR026489 -
Viun7g01808 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 865 IPR045318 GO:0006338|GO:0042054
Viun7g01808 866 MobiDBLite consensus disorder prediction 838 866 - -
Viun7g01808 866 MobiDBLite consensus disorder prediction 452 480 - -
Viun7g01808 866 ProSiteProfiles SET domain profile. 717 832 IPR001214 GO:0005515
Viun7g01808 866 Coils Coil 165 185 - -
Viun7g01808 866 CDD SET_EZH 717 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01808 Viun-Chr7 23254258 23265297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01808 706 860 C2H2 Transcription Factor Family AT2G23740 25.000 3.12e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g01808 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01808 - K11430 pvu:PHAVU_007G213900g 1582.39