Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01806 ATGGTGTCAAAACCTACCGACTCCGTTTCCAAACCTCGAGTAAAACAACTTGGAGAGGCTGCAAATGATGTATTGGGAACCTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATGTCATACCTCAGGAGTCCTAAAGGCAATATCAACAAGGGGTTCTTCACAGGAGGAAAATAGGAAAACTCCAATTCTTTCTAGAATTGACCGTCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGTATTATCTGCTACAAGTATCAAAATACCATATATTGAAAGATTACCGCCGTATACCTCTTGGATATTTCTGGACAGAAATCAGAGAATGGCGGAAGATCAGTCAGTTGTTGGAAGAAGAAGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACATGAGGAAGAAAAACATGAATTTTCCGAGGCTGAAGACCGTGTAATGTGGATGGCATTTGAGGAATATGGGTTAAATGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTCAGAAATTCAGGAGAGGTACAAAAGTATAAAGGAAAAGAACATTGGTATGTTGGATCAGCATTCGGAAAACCCAGGAGATTATGAATGTATTGGCATCTCTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTACAGATTTTTGATTGTCGTCTGCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACAGTATGGTGTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGAAGTTAAATGAAGTCAAAGGTGTGTCAACAGATGCAACTTCTGGGTCTGATCAAAATAAGAGAACTACAACTATGGAAGAGGCAGATGGGATATTGGCACCCTCCACTATAGAGGAACCTGGTAATCAGAGTACAGCACCTTTTGGAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTATCTCATTAAGTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACAGCACTTTGTGACTCAACAACCCCTCCTGATGGTTCTCAAAATTCTAATAAAAAACTGAAGACTATCTCAAATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTCTTGGGTGCATGTGATGAAAGTAAACATACTATTACTTGTGTAATTTTGGACAAATCTGATAAACATAATTCGAATAAATTAATAGACCCTTCTAGGACTTGCGATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACAAGTAAGATAGAATTTAAGTTGCCCAGCTCAATGGAAGGGAAAGTTGATGCGATGCCAGGCCTCTCAGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGATTAAAGACTTGCATGGAAATAGCTACTTACATGCATGCTGGAGGAGTGTCAATGTCCCACGGGTCTATCATTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACGGAGATGCCATCTAGGTCACGATTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTACTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACGCCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGCGTTAATGGTGGAACATGCTGTGAAAAGTATTGCGGTTGTTCAAAAAGCTGCAAAAATCGATTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGTCCTTGTTTTGCTGCAGGACGGGAATGTGACCCAGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGAATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTATCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGACCGCGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAATACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAACTGCTACGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATAGATGCTAGCGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTGTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2598 0.4157 MVSKPTDSVSKPRVKQLGEAANDVLGTLSLKINQLKKQIQAERIVYIKEKIQSNEKKLQCHTSGVLKAISTRGSSQEENRKTPILSRIDRPLCKFSGFSPVSGDKDHSNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEHEEEKHEFSEAEDRVMWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNIGMLDQHSENPGDYECIGISPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLVYPSEKQTVWCDPEGDKKPCSDQCYLQKLNEVKGVSTDATSGSDQNKRTTTMEEADGILAPSTIEEPGNQSTAPFGTEVDCHGSLNLNVPISLSVEKRKVTNLSDTALCDSTTPPDGSQNSNKKLKTISNDVITVNSDSSNNLLGACDESKHTITCVILDKSDKHNSNKLIDPSRTCDTDEQDKSIGDGPKDPTSKIEFKLPSSMEGKVDAMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIATYMHAGGVSMSHGSIIAPSSIMDDKGKFDAEYTEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVCQGRAKKHQSH 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01806 865 SMART CXC_2 651 688 IPR033467 -
Viun7g01806 865 SUPERFAMILY SET domain 617 834 IPR046341 -
Viun7g01806 865 CDD SET_EZH 716 832 - -
Viun7g01806 865 FunFam Putative histone-lysine N-methyltransferase EZH2 617 833 - -
Viun7g01806 865 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 865 IPR025778 GO:0031519
Viun7g01806 865 SMART set_7 716 837 IPR001214 GO:0005515
Viun7g01806 865 MobiDBLite consensus disorder prediction 837 865 - -
Viun7g01806 865 MobiDBLite consensus disorder prediction 453 480 - -
Viun7g01806 865 Pfam SET domain 727 830 IPR001214 GO:0005515
Viun7g01806 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 864 IPR045318 GO:0006338|GO:0042054
Viun7g01806 865 MobiDBLite consensus disorder prediction 453 479 - -
Viun7g01806 865 Pfam CXC domain 655 686 IPR041355 -
Viun7g01806 865 Gene3D SET domain 617 833 IPR046341 -
Viun7g01806 865 Coils Coil 165 185 - -
Viun7g01806 865 ProSiteProfiles CXC domain profile. 603 702 IPR026489 -
Viun7g01806 865 MobiDBLite consensus disorder prediction 844 858 - -
Viun7g01806 865 ProSiteProfiles SET domain profile. 716 831 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01806 Viun-Chr7 23254258 23265299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01806 705 859 C2H2 Transcription Factor Family AT2G23740 25.000 3.14e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g01806 SET 1e-09 No_clan