Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01796 ATGGCAAGGAAATTTGATATGATCAAGGATATTGATGGAAAAAGGGAGACTTTGAAACTTGTTGTCCGAATTGTGGATATGTGGTTTGTTGAGTCATGGGATTCAAAACGAAATATGGAGATGATTCTGACAGATCAAAAGGGTGATGTTATCCCTGCTATGATTAAGAAGGAAGACATTGCTACGTGGGAAGACAAGGTAAAGGAAGGAGAAAGTTATATAATGCATAACTTCAAAATTCTCAACAACAGAGCTCAATATAGAGTTTGCGACCACCCTTATAAGCTATTGTTTATTGGAGCAACATCTGTACGACGACAACCAATTGCCAGTATTCCTGCAAAAGTTTGGAAGTTCAAGAGTATAAAGGATATCATTGATGGAAACTATTCTGCAGATTTGTTGGTTGATGTCATTGGTGTGGTGGATAATGTGGAGGAGAAACCAAGTTACAAAAATGTTGTGTTTGACCTAAAGGACTTGAGTGGTGCGTCAATCTGTTGTACTCTTTGGGATTCATATTGTTTGCGTTTGGTTAGTTATTGGAGGGAAAGTCGTGACACAGCTTATCCAGCTATTATTCTTACTCAGGCAAAGATAAAGGCTGCCTCAGGTCCATGGCCGGTGTCATTGTCTAATTGTTGGAATGGATCGAAGTTGTTTATGGGAGATGATATATCAGAACTGATTGAATTTAGGAAGGAATTTTCAAAAACTACTGCTCATGAAATTTTCGAGGAGGGAAGCCAATATAGTGGATCTTCCCAGATTAGTCATGTTGATAGGTTTATGTATAAAACTGTTGTTAAGAGTGTTTCACAGATCCTGACTGTGATAGAGGAGATTTCATGTGTTACTGTTGCACATACACTTAAATTTAATTTAGGAAATCATGGATGGAGTTACTTGGTTTGTAACTTATGCGCAAAAAGAACATATGAAGTTGGTTCTTTTAAGTGTTTGAATTGTGATGGTTATAATGAGTATCCAAAAATGAGGTACAAGCTTGAAATTCAAGTGACTGATGGAAAAAAGGTTGCTAACTTCATGCTTTGGGACCAAGACTGCATCAATTTAATTGGTCTTTCTGCTGGTGACTTGCGAAAGAAAATGATCAAGGATGGTGAGGAGGATCCTAAGTGTTTTCCACAGGATCTAGACGTTCTTTTGGGTTGTACTTTGGCTTTCAAGGTCAAGCCACAAGGAAATAACCGACCTGCTTCAGTAATGAGAGTTTCAACTGATCGTGAAATCATAGGACACATTAGTAGTCTTCTTGGACAAACTGAGGTAATGGAAATTGTTGAAGCTAAGGAAAACTGTTCTGATCAATCAGAGCTTCGTAAGGGCAAGTCCATAGCAATTGAGGTTGGGAAACGTAGGAGTGCCAGTGAATCTGATGTCCATACTCATACTGGGAGTTCTTTAGCATTGGAACTTGCTGAATGTGGTGATAATGCAGCATGCGACTTATCTGCTGATACTGATAGTTCATTAATGTGCCTTTCTAGGACTGCTGATCTTGATCCGGATGTTGTTTTATGTGTGACGCCCAGAAAAAATCTTTCCACTACCAGTGACAATGAAGACATGCAGTATATTCCAGAAAATTTCATGGATTTTGATCTTTTGGAGGACCTCCCATTAGCCCAATTGTCAGCTACGAAGACAATGAAGATTATCAAGAAGGAGAAATGA 1698 0.3863 MARKFDMIKDIDGKRETLKLVVRIVDMWFVESWDSKRNMEMILTDQKGDVIPAMIKKEDIATWEDKVKEGESYIMHNFKILNNRAQYRVCDHPYKLLFIGATSVRRQPIASIPAKVWKFKSIKDIIDGNYSADLLVDVIGVVDNVEEKPSYKNVVFDLKDLSGASICCTLWDSYCLRLVSYWRESRDTAYPAIILTQAKIKAASGPWPVSLSNCWNGSKLFMGDDISELIEFRKEFSKTTAHEIFEEGSQYSGSSQISHVDRFMYKTVVKSVSQILTVIEEISCVTVAHTLKFNLGNHGWSYLVCNLCAKRTYEVGSFKCLNCDGYNEYPKMRYKLEIQVTDGKKVANFMLWDQDCINLIGLSAGDLRKKMIKDGEEDPKCFPQDLDVLLGCTLAFKVKPQGNNRPASVMRVSTDREIIGHISSLLGQTEVMEIVEAKENCSDQSELRKGKSIAIEVGKRRSASESDVHTHTGSSLALELAECGDNAACDLSADTDSSLMCLSRTADLDPDVVLCVTPRKNLSTTSDNEDMQYIPENFMDFDLLEDLPLAQLSATKTMKIIKKEK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01796 565 Gene3D - 3 106 IPR012340 -
Viun7g01796 565 CDD RPA1_DBD_B_like 137 234 - -
Viun7g01796 565 SUPERFAMILY Nucleic acid-binding proteins 4 105 IPR012340 -
Viun7g01796 565 Gene3D - 248 425 IPR012340 -
Viun7g01796 565 SUPERFAMILY Nucleic acid-binding proteins 118 237 IPR012340 -
Viun7g01796 565 SUPERFAMILY Nucleic acid-binding proteins 283 404 IPR012340 -
Viun7g01796 565 Gene3D - 111 247 IPR012340 -
Viun7g01796 565 CDD RPA1_DBD_A_like 19 104 - -
Viun7g01796 565 Pfam Domain of unknown function DUF223 40 132 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01796 Viun-Chr7 23079652 23083159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01796 43 367 Core DNA Replication Machinery Family AT5G45400 22.543 3.79e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01796 - - vun:114189569 1131.32