Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01791 ATGATGGAAGCTAGTTACGCGTCGCGAGTGTTTCGAGGTGTTCGTTTTGTTCTCCGTGGCTTCAATCCCGCCGCCGAAAGCCAGATCCGGGTTAAGCTTGAAGATGGCGGTGGAATTGACGCAGGGCAGTACGGTGGTAGTTGCAGTCATGTTATTGTCGACAAGATTGCTTATGACGATCCTCTGTGTGTTGCTGCAAGAAAGGACCGGAAGGCGGTCGTCACTGCACTCTGGGTTGATCACAGTGCTGATATTGGAATGCCCGTTGATGCTTCTTCGGTTATGTATAGACCTCCTAAAGACTTAGATGGAATACCAGGTGCAAAAGATTTGATAATGTGCTTGACTGGTTATCTACGGCAGGATCGGGATGACATTATGACAATGGTCGGCCTGATGGGTGCGAAGTTTTCTAAACCATTGGTAGCAAACAAGGTTACTCATCTCATATGCTATAAATTTGAAGGAGAGAAGTATCTGCTTGCCAAGAGATTGGGCACAATAAAGCTAGTTAATCATCGTTGGTTGGAAGATTGCTTGAAGGAATGGGTGCTTCTTCCTGAAGACAAATATAACAAGAGTGGTTTTGAACTAGAAATGACGGAGGAAGAGGCCAAGGATTCGGAGGAAGAGGGTGAAGATGCTAAGCTGGGACAATCAGGTGGGAGAAATATACAACAAAGCCCCCTTGGTTCGAAATTTGCCCATGCTGCAAATCATGGATTGTTGAAATCAGTAAGAGAGGCATCGAGCAACTTACCAGATTCTACTGGTCCACGGGTTTTGCCAAATGTCAATAATGGTGAAGACTCTTTAACCATTCCAGAAAGCAAGAGAAAATCTGATCAAGACTCTAGCTTTTATAATGTTGATGACTCAAAGATAAGCTATCAGACTCCTGATATTTCTAAATTACCTGACAAATATACAAATACCACTGAGTCTAAGAATGCTGATTATCCAAAGGCACTTGGCTGCCAGGACCCTGGCAATACGGCAAATACAAAATCATCTGTTCAGCGGTCTGGTCTGCATGGTAACACTACGGAGTCTAAGAAGTTGATAAATGAATTGACATCAACATCTGCAAGTGCAGCTGGAGTTGCACATTCAAATGAAAAGCTTAGAACCACAAGTTATTCTAGAAAGAACCAAAGGGAATTTTCTGTCCCAAGGATATTAGACGGAAGCTCAGGCATAGAAGGCAACAGATGTGAAAACAGTAAGGCTGACGAGGAAATTCAGTTTATGAAATCTACCAGTTTAGATATTTCTGGGAGAGGAAATGATTTTACTAAAGGGGATGAACCAATTAGTTTATTGCCTCAAAAGAGGATAAATGAAGCTTCTTCTACGAAATTAAAATCACGAAAGGTGTCTTCTGATGCAAAAGTCTCCATCCAATCAGCAAATGGTAAATCTCAAGGATTAAAAGTGACATCTCAGGTTGATGAGCCACCCAAAGCTGGTTCTAACTCCAACTCAGTGGCATTTGATGAGCATTTCTCAAGAAATGCTGGCCCAGAATCTGCACAGCGTGATAGTGTCTATCAGAATAGTCCACAATCGGCTATTCGAAGCATAAGTGAGTCTAAAATTAATGGCAAGCCTGATGTCACAAGTTCTGGATTGCGACAAGTTGGTTGTGATGAAGCCGGGCTGCATATCACCAAAAGTCTTGATTCCTCGTCAAAGGGAAACAAAAACTCTCATGATGTGGAATCCGGTGGTTGTACTAACTTGGATTTAAGCAATGAAGAATGTAATAAACTGGTTAGAAAATCACCCACAAAGAAGTCAGTTGTCAAGGGAATTTCAGGTTCTAAACCTAGAGTAAGTGCCACTGCTCGACATAAAAGATCACTTTCCTTGAATAAAACTAACCTTGGTGAAGGTGTAGCTTTATGCAGCGAAAGCAAAGAGATTTGTGATGCGAAGATTCATCAGGGTTGTCCCCAAAACCGGGATATTAACAATATGATGGAGCAAGAAGCAGTTACTAAAAATACAGATGATGCTTCTGACAGAGCTGACTTTTTTACCGATGAAACCGAGGCTCCAGATGATAAATGTGAATTTGAGTTTGGAATGGCACTAAATGAAGAATCAGTCCATCCTTCGGAAAAGCCGAATAGAGCAACAAAAGAGAAGTCAGAAACAATTTGCCCTGCAACAAAATGTGAAGAGGCAATGCCTCCTAAGAAATGCACAAATAAAGCAGAAATACAGAAAACGTCTTCTTTGTTAGTAAAGAATCAAGCAAGAGAATGTGCTGCTGGTAAAGCTAATGCCACAGTTAGTAAATACGCAGACGATGCAAGTGACAGAACTGAGACTTTGGATGATGAAACCGAAGATCCAGATGACAAACTTGAAAATGAGTTAGGAATGACAACTGAAGAAGAATTGGTTAATCCTTCCAAAAAACGAGATAAATCTACAAAGGTTCATCCTTCAAAAAAACGAGATAAATCTTCAAAAGAGAAGCCAGAAGCAATTTGTCCCGCGTCAAAATGTGAAGATGCAATGCCTCCTAAAGGAGTTACGAATAAAACTGAAAAACAGAAGCCATCTTCACTGGTAGTAAAGCATCAAGCAAGGAAACGTCCTGCTGGTAAAGCCAAGGCCACAGTTGCCAAGGATTTATCGAAATCTAAAGTTGCAGTATCTAAGGAAAAGGTTCCCAATGAAACGGGGGATGAGGCAGAGATAGAAACTGTGGAAGAAGTGCCCTCTCCTGCTGATCAACATGACAAGTCGGCCTTAGCAAGAAATAAGTCAGTGACTTTAGCTGAAGAAGAGAAGGAGAATAGACCAATTGATCTAATGCAGGATCCTGTGAAGGGCAGAAGCAATGACAATCCAACTAATAAATCTGATGTAAGGTCAACAAATATCAAGTCTACTAAAGTGGGGCTCAATCCATCTATATCAGAATCTAACACGAGAGTAAAGACTGAAGCGGCTTTTTTTATATTAAGCGGTCACCGTCTACAGAGAAAAGAGTTTCAGCAAGTAATCAAGCGCTTAAAAGGAAGGGTTTGCCGGGATTCTCATCAGTGGTCATATCAGGCGACACACTTTATAGCTCCAGACCCCTTACGCAGGGTTGAGAAATTCTTTGCTGCGGCTGCTTCAGGAAGGTGGATTCTGAAAATGGATTACCTAACTGACAGCAGTCAGGAAGGAAAACTCTTGGCGGAGGAGCCGTATGAGTGGCACAGGAATGGTCTCAGTGAGGATGGAGCAATCAATATGGAGGCTCCGAGAAAGTGGCGGCTAGTTAAAGAAAAAACAGGTCATGGTGCCTTCTACGGAATGCGTATTGTTGTATACGGCGATTGCATTGCTCCGCCTTTGGATACTCTGAAACGTGTCATCAAAGCTGGCGATGGAACAATATTAGCCACTTCTCCACCTTATACACGATTCCTTGGCACCGGAGTCGACTATGCTGTAGTTAGCCCTGGCATGCCACATGTTGATATCTGGGTCCAAGAGTTCTTAAAACATGAGATACCTTGTGTTGTAGCGGACTATTTGGTTGAGTATGTTTGCAAACCCGGGTTCTCCCTCGAGAAGCATGTGTTATACGGTACTCATTCTTGGGCAGAGAAATCATTGGATAAACTTAAAAGCAAAGCAGAGGAGATTGTTGCTCCTGAGGATTTCAGTGATGATGATGATAGTGATGATGTACCTTGCCAAGTGTGTGGATCCCGCGACAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAGTGGTTCTGTTGGGTGTGGAGTGGGTACCCACATCGATTGCTGCGATCCTCCACTAACACAAGTCCCTGAGGACGACTGGTTTTGTTCAAAATGCAGTACCACTCCAAACTCCTCAAAAAGTTCCACTAAAAGGAAAAAAAATGTTTTATCATAA 3915 0.424 MMEASYASRVFRGVRFVLRGFNPAAESQIRVKLEDGGGIDAGQYGGSCSHVIVDKIAYDDPLCVAARKDRKAVVTALWVDHSADIGMPVDASSVMYRPPKDLDGIPGAKDLIMCLTGYLRQDRDDIMTMVGLMGAKFSKPLVANKVTHLICYKFEGEKYLLAKRLGTIKLVNHRWLEDCLKEWVLLPEDKYNKSGFELEMTEEEAKDSEEEGEDAKLGQSGGRNIQQSPLGSKFAHAANHGLLKSVREASSNLPDSTGPRVLPNVNNGEDSLTIPESKRKSDQDSSFYNVDDSKISYQTPDISKLPDKYTNTTESKNADYPKALGCQDPGNTANTKSSVQRSGLHGNTTESKKLINELTSTSASAAGVAHSNEKLRTTSYSRKNQREFSVPRILDGSSGIEGNRCENSKADEEIQFMKSTSLDISGRGNDFTKGDEPISLLPQKRINEASSTKLKSRKVSSDAKVSIQSANGKSQGLKVTSQVDEPPKAGSNSNSVAFDEHFSRNAGPESAQRDSVYQNSPQSAIRSISESKINGKPDVTSSGLRQVGCDEAGLHITKSLDSSSKGNKNSHDVESGGCTNLDLSNEECNKLVRKSPTKKSVVKGISGSKPRVSATARHKRSLSLNKTNLGEGVALCSESKEICDAKIHQGCPQNRDINNMMEQEAVTKNTDDASDRADFFTDETEAPDDKCEFEFGMALNEESVHPSEKPNRATKEKSETICPATKCEEAMPPKKCTNKAEIQKTSSLLVKNQARECAAGKANATVSKYADDASDRTETLDDETEDPDDKLENELGMTTEEELVNPSKKRDKSTKVHPSKKRDKSSKEKPEAICPASKCEDAMPPKGVTNKTEKQKPSSLVVKHQARKRPAGKAKATVAKDLSKSKVAVSKEKVPNETGDEAEIETVEEVPSPADQHDKSALARNKSVTLAEEEKENRPIDLMQDPVKGRSNDNPTNKSDVRSTNIKSTKVGLNPSISESNTRVKTEAAFFILSGHRLQRKEFQQVIKRLKGRVCRDSHQWSYQATHFIAPDPLRRVEKFFAAAASGRWILKMDYLTDSSQEGKLLAEEPYEWHRNGLSEDGAINMEAPRKWRLVKEKTGHGAFYGMRIVVYGDCIAPPLDTLKRVIKAGDGTILATSPPYTRFLGTGVDYAVVSPGMPHVDIWVQEFLKHEIPCVVADYLVEYVCKPGFSLEKHVLYGTHSWAEKSLDKLKSKAEEIVAPEDFSDDDDSDDVPCQVCGSRDRGDVMLICGDESGSVGCGVGTHIDCCDPPLTQVPEDDWFCSKCSTTPNSSKSSTKRKKNVLS 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01791 1304 MobiDBLite consensus disorder prediction 759 966 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 288 318 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 362 545 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 821 835 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 461 500 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 273 287 - -
Viun7g01791 1304 Gene3D BRCT domain 1 95 IPR036420 -
Viun7g01791 1304 CDD BRCT_TopBP1_rpt7 990 1063 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 949 966 - -
Viun7g01791 1304 SUPERFAMILY BRCT domain 990 1076 IPR036420 -
Viun7g01791 1304 SUPERFAMILY FYVE/PHD zinc finger 1220 1290 IPR011011 -
Viun7g01791 1304 Gene3D BRCT domain 982 1099 IPR036420 -
Viun7g01791 1304 Gene3D BRCT domain 100 221 IPR036420 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 248 272 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 1285 1304 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 508 541 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 200 229 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 328 350 - -
Viun7g01791 1304 Pfam twin BRCT domain 111 175 IPR001357 -
Viun7g01791 1304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1198 1302 IPR013083 -
Viun7g01791 1304 SMART BRCT_7 982 1063 IPR001357 -
Viun7g01791 1304 SMART BRCT_7 1101 1188 IPR001357 -
Viun7g01791 1304 SMART BRCT_7 8 86 IPR001357 -
Viun7g01791 1304 SMART BRCT_7 99 183 IPR001357 -
Viun7g01791 1304 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 6 1300 IPR044254 -
Viun7g01791 1304 SUPERFAMILY BRCT domain 106 192 IPR036420 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 248 350 - -
Viun7g01791 1304 Gene3D BRCT domain 1100 1197 IPR036420 -
Viun7g01791 1304 SMART PHD_3 1234 1286 IPR001965 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 791 812 - -
Viun7g01791 1304 SUPERFAMILY BRCT domain 9 93 IPR036420 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 558 579 - -
Viun7g01791 1304 Pfam BRCA1 C Terminus (BRCT) domain 990 1059 IPR001357 -
Viun7g01791 1304 ProSiteProfiles Zinc finger PHD-type profile. 1232 1288 IPR019787 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 910 943 - -
Viun7g01791 1304 Pfam PHD-finger 1235 1286 IPR019787 -
Viun7g01791 1304 ProSiteProfiles BRCT domain profile. 6 96 IPR001357 -
Viun7g01791 1304 ProSiteProfiles BRCT domain profile. 991 1073 IPR001357 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 885 900 - -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 776 790 - -
Viun7g01791 1304 ProSiteProfiles BRCT domain profile. 109 193 IPR001357 -
Viun7g01791 1304 MobiDBLite consensus disorder prediction 599 619 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01791 129 231 Core DNA Replication Machinery Family AT4G02110 66.019 4.06e-35 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Viun7g01791 BRCT 2.1e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01791 K10728 - gmx:100799144 1842.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01791 7 22987089 22993490 Viun7g01791 7 22987089 22993490 ECH