Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01757 ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGGCCGTTGCCTCGCCGCCTCCGATATCTGGCCAAGCTCCTTCGGAAAGGACGATGATTTCGGCTTCGGTTACTCCCAAACCTCAAACCAACAAACCCCCACTGTCAAAACGGCCCAACCTCCCAAAGTTAGCGAGAAAGTTGAGACGAAGCCAGTGAAAAGGCAGAGGAAGAATCTCTACAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGCGACCCTAGAAAAGGGGTTCGTGTCTGGCTGGGTACCTTCAACACTGCGGAAGAAGCTGCGAGAGCCTATGATCGCGAAGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGAATATTCCATTCAAGCTCGTAATCCAATTCCACCCCTTCCTTTCGCAACCCAAAAACCAACCCCTTATCAGCAACAGTACCGTTGTGATCTCAATAATGCCCCCACAAATCTCAACTTCGAGTTCGGTTATGACCTGAACCACACCGGGGCATTTTCGTCCCACGTGGACTCTGTCAACGCTGACTCGGTTGTCGCTTCCGGCGACGAAAATTCAGGGTTAGCGTCGGGTTCAGAGGGCGCTCATTCGACGAACGAGTTCATGGGGTCTTGTCAGAAAGTGAACGGTTATTTCAACGGAGCAGTGATTGAGAAGGAGAAAGAGATAGAGGTGATTGAGGCTGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCTGAGGAACTGATGGCTTACGAGAATTACATGAAGTTTTATCAGATCCCGTACTATGATGGACAATCTACTATGCCACCGAATAATGTTCAGGAAAGTGTTGTCGGGGATCTCTGGAATTTCGATTGA 903 0.5028 MCGGAIIADFIPRRGRCLAASDIWPSSFGKDDDFGFGYSQTSNQQTPTVKTAQPPKVSEKVETKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARNPIPPLPFATQKPTPYQQQYRCDLNNAPTNLNFEFGYDLNHTGAFSSHVDSVNADSVVASGDENSGLASGSEGAHSTNEFMGSCQKVNGYFNGAVIEKEKEIEVIEAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSTMPPNNVQESVVGDLWNFD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01757 300 Coils Coil 238 268 - -
Viun7g01757 300 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Viun7g01757 300 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Viun7g01757 300 MobiDBLite consensus disorder prediction 39 53 - -
Viun7g01757 300 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 PANTHER DNA-BINDING DOMAIN 50 215 IPR044808 GO:0003700|GO:0009873
Viun7g01757 300 MobiDBLite consensus disorder prediction 39 68 - -
Viun7g01757 300 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Viun7g01757 300 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01757 Viun-Chr7 22529467 22531594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01757 1 131 AP2-EREBP Transcription Factor Family AT3G16770 55.474 2.51e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g01757 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01757 K09286 - gmx:100780763 481.1