Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01752 ATGAACAACTTCACACTTGCATCCATTTTGACGGCCATTTCTGCATTACTCTTCTTAGCAACTTATTTGACTAACACCCCAACAAGAGACACACAGAAACACCTCCATTTCCAAAAGCACATACAACTAGCCCAATCCACGTGCCAAGGAACACTCTACCCCGACCTATGTGTCTCAACCCTTGCCACATTCCCAGATCTTACCTCAAAATCTGTCCCGCAAGTCATTTCTTCCGTGGTCAACCATACCATGTACGAGGTAAAATCATCCTTCTACAACTGCACCACCCTCAAAAAGAAGATCAGAAACCTCAACCCACTTGACCAGAGAGCCCTCGACGACTGTCTCAAACTGTTCGAAGACACCAACGTGGAGCTCAAGACCACCATCGATGATCTCTCCAAGACCACCATAGGGTCCAAGCGCCACCATGACTTGCAGACTCTGCTCAGCGGAGCAATGACCAACTTATACACGTGCCTCGACGGCTTTGCTTACAGCAAGGGGCGCGTCAGAGACAGAATCGAGAAGAAGTTGCTTGAGATATCACATCACATGAGCAACTCCCTGGCCATGCTGAAGAAGGTTCCTCAAGTGAAGAGAACAACTTCGAAATCTGAGGTGTTCCCCGAATATGGAAATATGAAAAAGGGCTTCCCCTCCTGGGTGTCCCCCAATGACAGAAAGCTTCTCCAAGCGTCTGTGAATGAAACCAAGTTCGATCTCGTCGTTGCCAAAGATGGTACTGGCAATTTCACCACCATAGGGGAAGCACTCGCTGTGGCTCCCAACTCCAGCACAACCAGGTTTGTGATACACATAAAGGCGGGGGCATATTTCGAGAATGTGGAAGTGATTAGGAAGCAGACGAATCTGATGTTTGTTGGAGACGGCATTGGGAAGACAGTAGTGAAAGGCAGTAGGAACGTTGTGGACGGGTGGACAACTTTTCAATCAGCTACTGTTGCTGTTGTAGGAGAAGGATTCATAGCAAAGGGTATAACTTTTGAGAACTCAGCAGGGCCAGACAAACACCAAGCAGTGGCCCTGAGAAGTGGTGCTGACTTCTCGGCTTTTTTCCGTTGCAGTTTTGTTGGGTATCAAGACACACTTTATGTGCATTCCCTACGCCAATTCTACCGAGAATGTGACATTTATGGCACTGTAGACTTCATTTTTGGCAATGCAGCAGTGGTGTTCCAAAACTGCAACTTATACGCACGCAAACCAAACGAAAATCAGAAGAACTTGTTCACTGCGCAAGGCAGAGAGGACCCTAACCAAAACACTGGCATATCCATCTTGAACTGCAAGATTGCAGCTGCTTCAGACTTAGTCCCTGTCAAATCCTCCTTCAAGAGCTACCTGGGTCGTCCATGGAAAACGTACTCAAGAACTGTTTATCTAAAATCTTACATGGAGGATCTGATTGACCCAGCAGGGTGGTTGGAATGGAATGACACATTTGCGTTGGATACACTGTATTATGGAGAGTACATGAATAAGGGTCCAGGTTCAAACACAAGTGGCAGAGTTACATGGCCGGGTTATAGGGTCATAAACAGCTCCACTGAGGCAACCCAATTCACAGTTGCTGAGTTTATTCAAGGTAGTGACTGGTTGAACACCACAGGCATTCCATTCTTCTCTGGTTTGAGTTGA 1662 0.4693 MNNFTLASILTAISALLFLATYLTNTPTRDTQKHLHFQKHIQLAQSTCQGTLYPDLCVSTLATFPDLTSKSVPQVISSVVNHTMYEVKSSFYNCTTLKKKIRNLNPLDQRALDDCLKLFEDTNVELKTTIDDLSKTTIGSKRHHDLQTLLSGAMTNLYTCLDGFAYSKGRVRDRIEKKLLEISHHMSNSLAMLKKVPQVKRTTSKSEVFPEYGNMKKGFPSWVSPNDRKLLQASVNETKFDLVVAKDGTGNFTTIGEALAVAPNSSTTRFVIHIKAGAYFENVEVIRKQTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVAVVGEGFIAKGITFENSAGPDKHQAVALRSGADFSAFFRCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLVPVKSSFKSYLGRPWKTYSRTVYLKSYMEDLIDPAGWLEWNDTFALDTLYYGEYMNKGPGSNTSGRVTWPGYRVINSSTEATQFTVAEFIQGSDWLNTTGIPFFSGLS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01752 553 FunFam Pectinesterase 235 552 - -
Viun7g01752 553 FunFam Pectinesterase 41 198 - -
Viun7g01752 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Viun7g01752 553 Pfam Plant invertase/pectin methylesterase inhibitor 43 192 IPR006501 GO:0004857
Viun7g01752 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 197 IPR035513 -
Viun7g01752 553 SUPERFAMILY Pectin lyase-like 239 551 IPR011050 -
Viun7g01752 553 Pfam Pectinesterase 241 537 IPR000070 GO:0030599|GO:0042545
Viun7g01752 553 PANTHER PECTINESTERASE 16 542 - -
Viun7g01752 553 SMART PMEI_2 39 192 IPR006501 GO:0004857
Viun7g01752 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Viun7g01752 553 Gene3D - 235 552 IPR012334 -
Viun7g01752 553 CDD PMEI-like_3 46 197 - -
Viun7g01752 553 NCBIfam pectinesterase inhibitor domain 13 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01752 Viun-Chr7 22418966 22422606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01752 68 548 Carbohydrate Esterase AT4G02320 55.263 0.0 565