Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01748 ATGGATCCAGATTATGAAACAAAGTATGCCACTAATGGCAAAGTCATGTTTGGTTCAACCGTTCTTCTCTTCCTCCTCGTAATCGTTCTCCTTTTCGTTCACACTTTCCGCCATTCATGCTTTCCTCGCCGCAACCACGCTATTCGAATCCCTTCCAAGGGCCTTCTTCCTTGCTCTCTCAAATTCCTTCCCATCTTCACCTACTCATCCAACACCCACCGCTCTCTCCACGACTGCGCCGTCTACTTGTCGGAGTTTACCGACGGCCAACAATGCCGTGTGCTTCCCAACTGTAACCACGTGTTCCACGCCCATTGCATCGATGCATGGTTCACTTCTCACTCTAACTGTCCACTTTGTCGAATCACTGTTCACCGACACGCCATACCGGTCCAACCATTTTCTAACACTGAACCGGCTTCGTTGGGTTTTTCTTCTTTTCCCGCATCGGTTTGGTGCCCGAGGAAGTCGTTGGAAATGGTAAGCTTAATAGTGGAGCTAAAAGGTGGCCGGGATCCAGATCCGGGTCGTGGACCCATGATATCAAGGGCTGATAATTGA 561 0.4973 MDPDYETKYATNGKVMFGSTVLLFLLVIVLLFVHTFRHSCFPRRNHAIRIPSKGLLPCSLKFLPIFTYSSNTHRSLHDCAVYLSEFTDGQQCRVLPNCNHVFHAHCIDAWFTSHSNCPLCRITVHRHAIPVQPFSNTEPASLGFSSFPASVWCPRKSLEMVSLIVELKGGRDPDPGRGPMISRADN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01748 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 126 IPR013083 -
Viun7g01748 186 SUPERFAMILY RING/U-box 65 127 - -
Viun7g01748 186 ProSiteProfiles Zinc finger RING-type profile. 79 121 IPR001841 -
Viun7g01748 186 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 15 131 - -
Viun7g01748 186 SMART ring_2 79 120 IPR001841 -
Viun7g01748 186 Pfam Ring finger domain 78 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01748 Viun-Chr7 22392496 22393435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01748 9 128 Rapid Response to Elicitors AT3G16720 38.621 5.75e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01748 - - vun:114192688 383.645