Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01730 ATGGTTCCCTTTTCCAGCATACTGGGGCACGAAAAGTGTGACAGATATTTAATTTTTAGTGGAGAATCGGCCCTTGGGGATGGTTTTCGAGCATTTTTTTATTTTCTTGGCCTTGCTTACTGCTTTATCGGATTGTCGGCTATAACCGCTCGCTTCTTTCAATCGATGGAAAATGTGGTCAAGCACACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACTATTAGACATGAAAAAGTTTGGAATTACACTATTGCGGATATTAGCCTCTTGGCCTTTGGAACTAGCTTTCCCCAGATATCATTAGCCACCATTGATGCAGTACAGAACATGGGGAAGCTCTATGCTGGAGGTTTGGGACCCGGAACACTTGTTGGTTCTGCTGCATTTGACCTTTTCCCCATCCACGCTATTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATCTAGGGGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTTGTGACTCTGTGGGAGGCCCTGTTGACTGTACTACAATATGGATTACTATTGATACATGCTTATGCTCAAGATAAACGTTGGCCCTATATTTCTCTACCAATTGCAAGAGATGAGAGGCCAGAGGATTGGGTACCAGAGGAGACTCCTTATTTTCAACAGGAAGTCTATCAGCAGATGAATTTCTCTGAGATAAAGCATGTTAGTGAAGAAACTGGCGACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCACTGTACCTCAAACAGATGATGAGGCTGAAATTTTGGTCAAAGCTAAGGAAACAACGTTGGAGGATACCCACTTGCTTACAATTTGGAGACAGCAATTTGTGGATGCACTGAGGCAGTTGGAGAACCCAGAATCAAAAAAATTGAAAAATACGTATCTCCTCCTAGCTGGAACTTTATGGAAATTGCTGCTCTTACCATGGAGATTTCTTTTTTCTTTTGTTCCTCCTTGCCAAATTGCTCATGGATGGATCTCCTTCATTTGCTCCCTGCTTTTCATCAGCGGGATAGCTTACATTGTGACTAAGATCACAGAACTTATAAGTTGTGTTACAGGAATAAACGCTTACGTGATAGCATTTACAGCCCTAGCCAGTGGAACCTCGTGGCCTGATCTAGTGGCAAGCAAGATTGCTGCTGAACGTCAACAAACTGCTGATTCTGCAATTGCAAACATCACTTGCAGCAATTCAGTGAATATATATGTTGGAATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATCGAGAACCTCTCCGAATCCAAAGTGCAGGGGGACTAAGCTTTTCTCTGATTGTTTTCTTTTGCACTTCTGTTGGGTGTATATCGGTTTTGGTTTTCAGGCGTATAATTTTTGGCGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATCACCTGTGCCTTTTTCATGTTGTTGTGGATTATCTTTGTTGTACTATCTTCACTCAAGGTTTCTGGATTCATTTAG 1572 0.4218 MVPFSSILGHEKCDRYLIFSGESALGDGFRAFFYFLGLAYCFIGLSAITARFFQSMENVVKHTRKVVEVDPVTKTETIRHEKVWNYTIADISLLAFGTSFPQISLATIDAVQNMGKLYAGGLGPGTLVGSAAFDLFPIHAICVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPYFQQEVYQQMNFSEIKHVSEETGDTVDIFSIHSENPTVPQTDDEAEILVKAKETTLEDTHLLTIWRQQFVDALRQLENPESKKLKNTYLLLAGTLWKLLLLPWRFLFSFVPPCQIAHGWISFICSLLFISGIAYIVTKITELISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQQTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQSAGGLSFSLIVFFCTSVGCISVLVFRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01730 523 Gene3D - 305 517 IPR044880 -
Viun7g01730 523 Gene3D - 86 221 IPR044880 -
Viun7g01730 523 PANTHER SODIUM/CALCIUM EXCHANGER 12 228 - -
Viun7g01730 523 Pfam Sodium/calcium exchanger protein 352 515 IPR004837 GO:0016020|GO:0055085
Viun7g01730 523 Pfam Sodium/calcium exchanger protein 33 206 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01730 Viun-Chr7 22257508 22262896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01730 5 523 Antiporters AT2G47600 71.375 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01730 K03452 K05849 gmx:100792839 948.732