Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01726 ATGAGCGGAGCCAAGGGGAAGAAGAAGGGAGCAAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGACAAGATTATGGACATTGCTTCTCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGCGGCAAGGCCGGTGCACTCGGCGATTCCGTTACTGTCACACGGGACAAGAACAAGATCACCGTTACCTCCGACAGCAACTTCTCTAAAAGGTATCTGAAATATTTGACCAAGAAGTACTTGAAAAAGCACAATGTTAGGGATTGGCTTCGGGTGATTGCATCCAACAAGGACAGGAATGTCTATGAGTTGAGATATTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.475 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01726 119 Gene3D - 1 119 IPR038526 -
Viun7g01726 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Viun7g01726 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Viun7g01726 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01726 Viun-Chr7 22234371 22235787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01726 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.793 3.19e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01726 K02891 - pop:7455994 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01726 7 22234371 22235787 Viun7g01726 7 22234371 22235787 ECH
Viun7g02064 7 25473764 25474864 Viun7g01726 7 22234371 22235787 ECH