Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01700 ATGTCTTTTGCAGATTCAACGTGGTTCACGTCCCTCTCGTGTTCATTGAATGCAACTCCAAATCTGCCTCACTGGCTGAGATTCATTTTCCTCTCTCCATGCCCTCAGAGAGCTCTTTTGTCTGGTGTTGACGTTCTGCTTCTGTTCATCCTCTTTGTGTTTGCGCTTCTAAAGCTCTATTCTAGGCTCACTTCCAATGCCAACGCTAACTCACACCTTGATAAACCACTTATCAGAAACAACAGAGTTTCTGTCAAGACAACGGCATGGTTTAAGCTAACTCTAACTGCAACCGCTCTTTTGACAATATTGTACACGGTGGCCTGCATTCTAGTGTTTGTCAGTTCCACCAACCAGCCCTGGAAGCAAACTGATGGCTTGTTTTGGTTACTTCAGGCCATAACACAACTAGTCCTCGTAGTCTTGATCGTCCACGAGAAAAGATTTGAAGCTGTTGCTCACCCTTTGTCTCTCAGAATATACTGGATTGCGAATTTCATTGTGGTTTCTCTGTTCACTGCTTCTGGGGTCATACGTTTGGTCTCTGCGGGAGTGGAAGATGGGAAACACTTCAGCTTCATGGTTGATGATACGGTTTCTTTCATTTCTTTACCCTTGTCACTTTTTCTGCTCTGTGTTGCGGTTAAAGGGTTCACCGGGATTGTGTCTGGCGAAGAAACAGAACCCCTTATTGATGAGGAAACAAAACTACATGAGAAATCCAACCTTACTGGCTTTTCTTCAGCTTCTGCAGTATCCAAGGCCTTTTGGATTTGGATAAATCCGTTGTTGAACAAAGGGTACAAGTCACCTTTGAAGATTGATGAAATTCCATACCTTTCACCTCAGCATCGAGCTGAGAGGATGTCCGTTATCTTTGAATCGAAGTGGCCTAAATCAGATGAGAGGTCGAAGCACCCGGTTCGAACAACGTTGCTTCGGTGTTTCTGGAGGGATATAGCCTTCACAGCATTTCTTGCTGTTATTAGGCTATCTGTGATGTTCGTAGGACCAGTTCTCATTCAAAGTTTTGTTGATTTTACAGCAGGGAAAGGTAGCTCTGTGTATGAAGGGTACTACCTCGTGTTGATTCTCCTGTGTGCCAAATTTGTAGAAGTTTTGACAACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGGATGCTTATCAGATGCACCCTCATCACTTCTTTGTACAAGAAGGGGCTCAGGCTAACGGGTTCCGCGAGGCAAGATCATGGTGTTGGGCCTATTGTCAATTACATGGCTGTTGATACCCAACAACTCTCTGATATGATGCTTCAGTTACATGCTGTGTGGATGATGCCGTTTCAAGTCGGCATTGGTTTGTTTTTGCTGTACAATTGTCTGGGAGCCTCGGTGATTACGGCTACGATTGGACTTCTTTGTATCATTGCATTTGCTGTGGTGGCTAATAGAAGGAACAAGTATTTCCAGTTTAATTCCATGATGTGCCGTGATTCAAGGATGAAGGCAGTGAATGAGTTGCTTAATTACATGCGAGTCATCAAGTTCCAAGCATGGGAAGAACATTTCAATGGGAGGATTTTGGATTTCCGAAAGTCTGAGTTTGAGTGGCTCTCCAAGTTTATGCATTCAATCTGTAGCGTTATTATTGTGTTGTGGAGCACCCCATTGTTGATATCAACTCTGACGTTTGCTACCGCGCTTTTTCTTGGAGTTCGACTTGATGCAGGCACGGTTTTCACTACCACAACTGTGTTTAAGATCCTGCAGGAACCTATTAGGACCTTTCCTCAGAGTATGATATCTCTTTCACAAGCGCTGGTATCACTTGGGCGGTTAGATAGGTACATGTCTAGCAGGGAATTGTCAGATGATTCGGTTGAGAGAGAGGAGGGGTGTGGTGGACGCATTGCTGTGCAGGTCAGAGACGGAACCTTTAGCTGGGATGATGATGGCCAGCTGCAGGACTTGAAAAACATTAATTTGGAGATTAATAAGGGGGAGATTACAGCAATTGTTGGGACTGTGGGGTCGGGGAAATCTTCACTCCTTGCTTCAATTCTTGGTGAGATGCACAAAAATTCTGGGAAGATTCAAGTTTGTGGGAGTACTGCTTATGTTGCACAAACATCTTGGATTCAAAATGGGACGATTGAGGAAAATATTCTCTTTGGCTTACCAATGAACAGGCAGAAGTACAATGAAGTGATCAGAGTTTGTAGCTTGGAGAAAGACTTGGAAATGATGGAGCATGGTGACCAGACAGAGATTGGAGAACGTGGCATCAACCTAAGTGGGGGTCAGAAGCAGCGCATACAACTTGCCAGGGCTGTGTATCAAGATTCTGATATATATCTTCTTGATGATGTTTTCAGTGCTGTAGATGCACATACTGGCACTGAAATATTCAAGGAATGTGTGAGGGGGTCTCTTAAAGGAAAGACCATTATTCTTGTAACACACCAAGTAGACTTCCTGCATAATGTGGATCTCATAGTGGTTATGAGGGATGGACAGATAGTACAATCAGGGAAGTACGATGATCTACTTGCTTCTGGAATGGATTTTAGTGCTCTTGTTGCAGCACATGAGACATCTATGGAACTAGTGGAGCAAGGTGCGGTTGTGCCTGGGGAAAATCTGAACCAGCCAATAAAATCACCAAAGGCAGGTTCTAAAAACAGACAAGCCAATGGTGAAAGCAATTCTCTTGACCAGCCTAAGTCTGGCAATGAAAGTTCTAAGCTCATCAAAGAAGAGGAAAGAGAAACTGGGAAAGTTAGCTTTCGTATCTATAAACTGTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTGGAGGAGTAATCTTTCTTTCTGTGTTGTGGCAAGCTTCTATGATGGCGAGTGATTATTGGTTGGCTTATGAAACATCAGAAGAGCATGCACAGTTCTTCAATCCTTCAGTGTTTATTTCTATCTACGGAATTATTGCTGTAGTTTCAGTTATTTTGATTGTGCTAAGATCCTACGCTGTTATGGTCCTCGGGTTAAAGACAGCACAGATTTTCTTCACTCAAATTCTCCACAGCATCTTACATGCCCCCATGTCTTTCTTTGACACAACTCCATCCGGGAGAATTCTAAGCAGGGCATCCACTGATCAGACCAATGTTGATATCTTTATCCCCCTGTTCCTCAATTTTGTGGTAGCCATGTACATTACAGTGATCAGCATCTTCATAATCACATGTCAAAATTCTTGGCCGACAGCTTTCTTGTTAATCCCTCTTGCTTGGTTAAACATTTGGTACCGGGGTTATTTTCTTGCTTCGTCTCGTGAGTTAACTCGTCTGGATTCAATTACAAAAGCACCTGTCATTCACCATTTCTCTGAAAGCATTTCGGGGGTCATGACAATCCGCGCATTCAAAAAGCAGAAGGAGTTTTGCTTAGAAAACATCAAACGGGTAAATTCTAATTTGAGAATGGATTTCCACAACTTCAGTTCCAATGCGTGGTTGGGTTTCCGCTTAGAATTGCTTGGAAGCATAGTGTTTTGCTTCTCCGCCATGTTCATGATCATGTTACCCAGCAATATCATAAAGCCAGAGAATGTTGGCCTGTCGCTCTCATATGGATTGTCATTAAACGCCGTGATGTTCTGGGCCATATACATGAGCTGTTTCATTGAAAACAAATTGGTATCTGTTGAAAGGATCAAACAGTTCACAAATATTCCATCGGAAGCAACATGGAGAAACAAGGATCTTGTGCCTCCTGCAAATTGGCCTGGTCAAGGCAATGTTGATATCAAAGATTTGCAGGTTAGATATCGTCCAAACACCCCTTTGGTTCTGAAAGGCATCACCTTAAGGATCAATGGAGGGGAAAAAGTTGGTGTTGTTGGTCGAACAGGTAGTGGAAAATCAACTTTGATTCAAGTTTTCTTCAGGCTGGTGGAACCAACAGGAGGAAAAATAATCATTGACGGCATTGACATATCTATCTTGGGACTTCATGATCTTAGATCACGGTTTGGTATCATCCCTCAAGAGCCTGTCCTTTTTGAAGGAACAGTTCGAAGTAACATTGATCCAACTGGACAGTATACAGACGAAGAGATATGGAAGAGTTTGGAACGTTGTCAACTAAAAGAAGCAGTGGCTTCCAAGCCTGAGAAACTTGACTCTTCAGTGGTTGATAATGGAGATAACTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTTGGGAAGGGTTATGCTTAAGCAAAGTAGGTTGCTGTTTATGGATGAGGCAACAGCCTCTGTTGATTCTCAAACCGATGCTGTGATTCAAAAGATCATCCGAGAGGACTTTGCATCACGTACCATCATCAGCATTGCTCATAGAATACCAACTGTAATGGACTGTGATAGAATTCTAGTTGTAGATGCAGGGAGGGCCAAAGAATTTGACTCACCAGCCAACTTGGTCCAAAGGCCATCACTCTTTGTTGCTTTAGTTCAAGAGTATGCCAATCGCTCAAGTGGCCTATAA 4503 0.4326 MSFADSTWFTSLSCSLNATPNLPHWLRFIFLSPCPQRALLSGVDVLLLFILFVFALLKLYSRLTSNANANSHLDKPLIRNNRVSVKTTAWFKLTLTATALLTILYTVACILVFVSSTNQPWKQTDGLFWLLQAITQLVLVVLIVHEKRFEAVAHPLSLRIYWIANFIVVSLFTASGVIRLVSAGVEDGKHFSFMVDDTVSFISLPLSLFLLCVAVKGFTGIVSGEETEPLIDEETKLHEKSNLTGFSSASAVSKAFWIWINPLLNKGYKSPLKIDEIPYLSPQHRAERMSVIFESKWPKSDERSKHPVRTTLLRCFWRDIAFTAFLAVIRLSVMFVGPVLIQSFVDFTAGKGSSVYEGYYLVLILLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLTGSARQDHGVGPIVNYMAVDTQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGASVITATIGLLCIIAFAVVANRRNKYFQFNSMMCRDSRMKAVNELLNYMRVIKFQAWEEHFNGRILDFRKSEFEWLSKFMHSICSVIIVLWSTPLLISTLTFATALFLGVRLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELSDDSVEREEGCGGRIAVQVRDGTFSWDDDGQLQDLKNINLEINKGEITAIVGTVGSGKSSLLASILGEMHKNSGKIQVCGSTAYVAQTSWIQNGTIEENILFGLPMNRQKYNEVIRVCSLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGSLKGKTIILVTHQVDFLHNVDLIVVMRDGQIVQSGKYDDLLASGMDFSALVAAHETSMELVEQGAVVPGENLNQPIKSPKAGSKNRQANGESNSLDQPKSGNESSKLIKEEERETGKVSFRIYKLYCTEAFGWWGIGGVIFLSVLWQASMMASDYWLAYETSEEHAQFFNPSVFISIYGIIAVVSVILIVLRSYAVMVLGLKTAQIFFTQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDIFIPLFLNFVVAMYITVISIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFKKQKEFCLENIKRVNSNLRMDFHNFSSNAWLGFRLELLGSIVFCFSAMFMIMLPSNIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKLVSVERIKQFTNIPSEATWRNKDLVPPANWPGQGNVDIKDLQVRYRPNTPLVLKGITLRINGGEKVGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISILGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKEAVASKPEKLDSSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFASRTIISIAHRIPTVMDCDRILVVDAGRAKEFDSPANLVQRPSLFVALVQEYANRSSGL 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01700 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1492 IPR003439 GO:0005524
Viun7g01700 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 856 IPR027417 -
Viun7g01700 1500 Pfam ABC transporter 653 786 IPR003439 GO:0005524
Viun7g01700 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1221 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01700 1500 ProSitePatterns ABC transporters family signature. 760 774 IPR017871 GO:0005524|GO:0016887
Viun7g01700 1500 Gene3D ABC transporter type 1, transmembrane domain 904 1239 IPR036640 GO:0005524|GO:0016020
Viun7g01700 1500 FunFam ABC transporter C family member 5 904 1239 - -
Viun7g01700 1500 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 247 1493 - -
Viun7g01700 1500 MobiDBLite consensus disorder prediction 881 907 - -
Viun7g01700 1500 SUPERFAMILY ABC transporter transmembrane region 312 614 IPR036640 GO:0005524|GO:0016020
Viun7g01700 1500 Gene3D - 614 871 IPR027417 -
Viun7g01700 1500 MobiDBLite consensus disorder prediction 875 915 - -
Viun7g01700 1500 FunFam ABC transporter C family member 3 1241 1492 - -
Viun7g01700 1500 CDD ABC_6TM_ABCC_D2 944 1233 IPR044726 GO:0140359
Viun7g01700 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 858 IPR003439 GO:0005524
Viun7g01700 1500 Gene3D - 1241 1491 IPR027417 -
Viun7g01700 1500 Pfam ABC transporter transmembrane region 322 588 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01700 1500 Pfam ABC transporter transmembrane region 945 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01700 1500 SUPERFAMILY ABC transporter transmembrane region 938 1238 IPR036640 GO:0005524|GO:0016020
Viun7g01700 1500 CDD ABCC_MRP_domain1 635 835 - -
Viun7g01700 1500 FunFam ABC transporter C family member 4 618 876 - -
Viun7g01700 1500 Pfam ABC transporter 1275 1423 IPR003439 GO:0005524
Viun7g01700 1500 SMART AAA_5 662 843 IPR003593 GO:0016887
Viun7g01700 1500 SMART AAA_5 1284 1468 IPR003593 GO:0016887
Viun7g01700 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 321 601 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01700 1500 FunFam ABC transporter C family member 10 304 617 - -
Viun7g01700 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1491 IPR027417 -
Viun7g01700 1500 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Viun7g01700 1500 Gene3D ABC transporter type 1, transmembrane domain 295 613 IPR036640 GO:0005524|GO:0016020
Viun7g01700 1500 CDD ABCC_MRP_domain2 1256 1476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01700 Viun-Chr7 21992143 22000208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01700 632 851 Calmodulin-binding Proteins AT2G36910 30.932 7.66e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01700 - K05666 gmx:100793361 2690.6