Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01691 ATGGTCGAAACCAGACGCAGCAGCTCCTCCTCTTCCAAGCGCTCTCTCTCTTCCTCCTCTCCCCCCAACAACACCAAAAGATCCAAGGTGTCCGAGGATTCCTCATCAACAACCGTGCCCTCCGTAGCTCCGGTCAACGAATCTGGACCCGCCAATGAATCTGCCGAACCGGAGCTGCGGCCCTCTGATCTGCCCGATACGGCGTCGTTGAAGGCCGTCGATGGGTGTGATGCGATTTCGCCTGATAAATCTCCGTCTACACCTGTGGAGGGGGAGGCTTTGGTGTCCCCTCAGTGTCTAGGTGAAACAGCGGAGAAATCGAAGGGGGCTGGGGCGGCGGCGACTGTGTCCGCGGGCGGTCGGTCGAAGAAACGCCCTACGAAATTGAACCCCAAGGTTGCGTGGGCAAAGCTCCTTTCACAGTGTTCTCAGAATCCTCATGTGTCCATTAGTGATCTTAGCTTCACTGTTGGTCAAGGTCGTAATTGTAATTTATGGCTTAAAGATCCCACTGTTGGTAATATGTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGCTCGTCTGTTGCATTACTTGAAATCACAGGGGGCAAAGGTTCTATTCAAGTTAATGGCAGAACTCATCGAAAGAATACCCGTTTGATTTTAAGTGGAGGAGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAGCTCACAAATAACAATATTAGTCATGCTGGTATACCTTCTTCTGTGAGTATTTTAGAAGCCCAGAGTGCTCCTATAAATGGAACACAAGTTGAAGCTAGATCTGGTGACCCTTCTGCCGTTGCTGGAGCTTCAATATTGGCCTCTTTATCTAATCTTCATAAAGACTTATCTCTCCTTTCATCTCCTGCTAAAAGTGGAAAGAATGTGCAACAGAACACTGACATTTCATCACTACCTTCTGGCAATGGGGATGATGTGCCTGACAGTGAAATGAAGGATGCCACCACTAAAGATGTACCATCATCTGGAGTTTTCTCTGCTGACAAAACTGTTCTAGCATCCTCTAACACTGTTAATGAAAATCCCAGTCTTGACGCAACTGAAGTTGACACAACTGTGGATGCTGATGTTGGGAAGGTAGCTGCTGCTACATATGAATTAAGGCCATTACTGCGCATGCTTGCTGGCTCATGTCCTGAACTTGATTTAAGTTGTGGCATTAATAAGATATTGGAAGAGCGAAGGGAATTAAGAGAACTCCTTAAAGATGTTGATACCCCAACAATATTGGCTTCAACCAGGCGGCAAGCATTCAAGGACAGTTTAGAACAGAGAATTCTCAAATCTGAGGATATTGATGTCTCTTTTGAAACTTTCCCCTATTATCTGAGTGATACAACAAAGAGTGTTTTGATCGCTTCTACATTTATTCATTTGAAGTGCGATGGTTTTTCAAAATATGCTTCCGACCTCCCATCAGTGTCTCCGCGAATATTGCTATCTGGTCCTGCAGGTTCGGAAATATATCAAGAGACTTTGTGCAAGGCACTAGCGAAGCATTTTGGTGCCAGGCTACTGATTGTGGATTCCCTTTCATTGCCCGGTGGAGCACCTGCAAAAGAATTAGATTCTGCTAAAGAAAGTTCCAGACCTGAAAGGCCATCTGTGTTTGCCAAGAGAAGTTCCCAGACTGCCACATTACATCACAAGAAACCAGCGTCTAGTGTTGACGCTGAAATTATAGGTGGATCCACGCTAAGTTCTCAAGCTATGCTGAAGCAAGAGGTTTCCACTGCATCATCAAAAGGGACTTCTCTTAAAGAGGGTGATAGAGTAAAATTTGTTGGGAATTTTCCTTCTGCCGTCTCGGCACTACCAAATTATCCTTCAAGGGGACCAAGCTATGGCTCCCGGGGTAAAGTTATGCTTGCTTTTGAAGATAATGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATAGAGGGTTCTTTTGTTCGGCAAATCATTTACTACGGGTAGATGGCTCCGGAGGGGATGATACGGACAAAGTTGCAATAAATGATATCTTCGAGGTTACCTCTAATCAGAGTAAAAGTGGTCCATTAGTGTTGTTCATAAAAGATATAGAGAAGACAATGGTTGGGAACTATGAAGTTTTGAAAAATAAATTTGAAAGCTTGCCACCAAATGTTATCGTTATTGGCTCTCATACTATGCTTGACAATAGAAAGGAGAAGACCCAACCTGGTGGCCTTCTATTTACCAAGTTTGGGAGCAATCAGACAGCACTACTCGATCTTGCCTTCCCGGATAACTTTAGTAGACTACATGATCGGAGCAAAGAAACCCCTAAAGTAATGAAGCAACTTGGGCGCCTTTTCCCAAACAAAGTGACAATACAGCTGCCTCAGGATGAGGGTTTACTTTCCGATTGGAAGCAACAACTAGAACGTGATATTGAAACTATGAAAGCTCAGTCCAATATTGTCAGCGTTCGCACGGTTCTCAATAGGATTGGATTGGATTGCCCTGACCTTGAGACTCTGTGCATCAAAGATCAAACCCTAGCTACTGAAAGTGTGGAGAAGATCGTTGGCTGGGCTATAAGTTACCATTTTATGCATTCATCCGAAGCTTCTACCAAAGATTCTAAGCTTGTGATATCTGCAGAAAGCATTAACTATGGGCTTAACATTCTACATGGCATTCAAAATGAGAACAAAAGCTTGAAAAAATCACTCAAGGATGTGGTTACTGAGAATGAGTTTGAGAAGAAGCTTCTTGCTGATGTTATTCCACCAACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTAAAGGACACCTTGAAGGAATTGGTTATGCTTCCTCTTCAGAGGCCTGAATTATTTTGCAAAGGACAGCTCACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGAACAGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAAGCTGGAGCAAATTTCATTAACATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAATATGTAAAAGCAGTTTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGCTAGGAAGACGTGAAAACCCCAGTGAGCATGAGGCTATGCGAAAAATGAAAAATGAGTTTATGGTTAATTGGGATGGTTTGCGTACTAAAGATAAAGAGCGGGTACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGACGGCTTCCAAGACGATTGATGGTTAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTCAGAGTCATTTTAGCGAAAGAAGATCTGGCACCTGATGTTGATTTTGAAGCAATGGCTAATATGACTGATGGATACTCTGGGAGTGATCTAAAGAACCTTTGTGTCACAGCAGCTCACTGCCCAATACGAGAGATCTTAGAGAAAGAAAAGAAGGAGAAAAGCTTAGCACTATCTGAGAACAAACCTTTACCTGGATTGTCTGGCAGCTCCGACATTCGGCCTTTGAAGATTGATGATTTTAGATATGCACATGAGCAGGTGTGTGCGAGCGTGTCATCAGAGTCAACAAATATGAATGAACTACTCCAATGGAATGACCTCTATGGAGAAGGAGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATGTAA 3765 0.4329 MVETRRSSSSSSKRSLSSSSPPNNTKRSKVSEDSSSTTVPSVAPVNESGPANESAEPELRPSDLPDTASLKAVDGCDAISPDKSPSTPVEGEALVSPQCLGETAEKSKGAGAAATVSAGGRSKKRPTKLNPKVAWAKLLSQCSQNPHVSISDLSFTVGQGRNCNLWLKDPTVGNMLCKLSHIERGGSSVALLEITGGKGSIQVNGRTHRKNTRLILSGGDEVVFGSSGKHAYIFQQLTNNNISHAGIPSSVSILEAQSAPINGTQVEARSGDPSAVAGASILASLSNLHKDLSLLSSPAKSGKNVQQNTDISSLPSGNGDDVPDSEMKDATTKDVPSSGVFSADKTVLASSNTVNENPSLDATEVDTTVDADVGKVAAATYELRPLLRMLAGSCPELDLSCGINKILEERRELRELLKDVDTPTILASTRRQAFKDSLEQRILKSEDIDVSFETFPYYLSDTTKSVLIASTFIHLKCDGFSKYASDLPSVSPRILLSGPAGSEIYQETLCKALAKHFGARLLIVDSLSLPGGAPAKELDSAKESSRPERPSVFAKRSSQTATLHHKKPASSVDAEIIGGSTLSSQAMLKQEVSTASSKGTSLKEGDRVKFVGNFPSAVSALPNYPSRGPSYGSRGKVMLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDTDKVAINDIFEVTSNQSKSGPLVLFIKDIEKTMVGNYEVLKNKFESLPPNVIVIGSHTMLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLGRLFPNKVTIQLPQDEGLLSDWKQQLERDIETMKAQSNIVSVRTVLNRIGLDCPDLETLCIKDQTLATESVEKIVGWAISYHFMHSSEASTKDSKLVISAESINYGLNILHGIQNENKSLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDFEAMANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKEKSLALSENKPLPGLSGSSDIRPLKIDDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01691 1254 Pfam ATPase family associated with various cellular activities (AAA) 990 1119 IPR003959 GO:0005524|GO:0016887
Viun7g01691 1254 Gene3D - 1122 1216 - -
Viun7g01691 1254 SMART AAA_5 986 1123 IPR003593 GO:0016887
Viun7g01691 1254 MobiDBLite consensus disorder prediction 1 128 - -
Viun7g01691 1254 Pfam AAA+ lid domain 1143 1179 IPR041569 -
Viun7g01691 1254 MobiDBLite consensus disorder prediction 297 319 - -
Viun7g01691 1254 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 432 1253 - -
Viun7g01691 1254 CDD RecA-like_ATAD1 953 1119 - -
Viun7g01691 1254 Gene3D - 134 244 - -
Viun7g01691 1254 SUPERFAMILY SMAD/FHA domain 135 231 IPR008984 GO:0005515
Viun7g01691 1254 MobiDBLite consensus disorder prediction 297 338 - -
Viun7g01691 1254 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 948 1124 - -
Viun7g01691 1254 MobiDBLite consensus disorder prediction 1 48 - -
Viun7g01691 1254 ProSitePatterns AAA-protein family signature. 1093 1112 IPR003960 GO:0005524|GO:0016887
Viun7g01691 1254 Gene3D - 948 1228 IPR027417 -
Viun7g01691 1254 MobiDBLite consensus disorder prediction 535 572 - -
Viun7g01691 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 949 1228 IPR027417 -
Viun7g01691 1254 MobiDBLite consensus disorder prediction 551 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01691 Viun-Chr7 21868729 21881124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01691 949 1198 Calmodulin-binding Proteins AT3G56690 38.911 2.17e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01691 - - gmx:100801477 2209.11