Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01685 ATGGGTGACAACATCAACATTGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTATAACTTCACATCTTCAGCTTCAACTGCAAGTGATAGCTGTGCACAAGATGGGGTGATGAAGGAGCAGGATCGGTTGCTTCCAATAGCTAATGTTGGGAGAATCATGAAACAAACTCTTCCCCCGAATGCCAAGATCTCAAAAGAAGCAAAAGAAACCATGCAGGAATGTGTTTCTGAGTTCATCAGCTTTGTCACTGGGGAAGCTTCCGACAAGTGTCACAAGGAGAAGCGCAAAACGGTGAATGGTGATGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTACGCTGACCCTCTTAAAAGGTACTTGCATAAGTATAGGGAGTTGGAGGGGGAGAGAGCAAACCAAAATAAGAGTAACACTTACGAAAACAACATTGCAAACATATAA 450 0.4356 MGDNINIGKVLDREGFKYNFTSSASTASDSCAQDGVMKEQDRLLPIANVGRIMKQTLPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYADPLKRYLHKYRELEGERANQNKSNTYENNIANI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01685 149 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Viun7g01685 149 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Viun7g01685 149 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Viun7g01685 149 Coils Coil 119 139 - -
Viun7g01685 149 FunFam Nuclear transcription factor Y subunit B-3 25 148 - -
Viun7g01685 149 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Viun7g01685 149 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Viun7g01685 149 Gene3D Histone, subunit A 24 148 IPR009072 GO:0046982
Viun7g01685 149 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 139 IPR027113 GO:0001228|GO:0006355|GO:0016602
Viun7g01685 149 SUPERFAMILY Histone-fold 40 139 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01685 Viun-Chr7 21780894 21781612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01685 18 137 CCAAT-HAP3 Transcription Factor Family AT2G47810 70.455 5.26e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Viun7g01685 CBFD_NFYB_HMF 6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01685 K08065 - gmx:100817274 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01685 7 21780894 21781612 Viun7g01685 7 21780894 21781612 ECH