Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01669 ATGCTCCTTCTGTGTTTGGTCTTCAAGATTTCATCGCTTCCTCTTCTTACAAGGATATTGTTATTGAATCAGAATGGTAAGGGTGCGTGCGGGAGACAGAAAGAAGAGATTCTGAGTCAGCTTCGTGAACTAATAAAGTTGGAGCCTGACTTGATTCATGGAGAAGTAGATGCTGAACCACGACAGCTATTTGAAAATTTGTCTACTGGTTTTGAACGTGACATAGAGACCAATATGTTTCCTTCATACGAGGTGCAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGACCGTGCAAATCAAATTGTTCCTTGTGATACGTCAGTGAGTGATTATGGCGAGGTGGTTTCAGCTAAAGATCCAAGCTTTATTAGCATCCCTGCAAGTCACACCTATTGTAACAACCAAGAAGAAGCATCAAATTATTTTAAGCCTGAAAACTTGTCTCCTACTACTCCTAAAGCTACTCCTTGTGAGTTAACGAGTCATGAAAGAGATTCAGCATTATTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGAGAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGAATGAGAATTAAGGGTCGGTTTGTGAAAGATGAAACACAAAAACAATAG 642 0.4065 MLLLCLVFKISSLPLLTRILLLNQNGKGACGRQKEEILSQLRELIKLEPDLIHGEVDAEPRQLFENLSTGFERDIETNMFPSYEVQAGVFCWHGESSDRANQIVPCDTSVSDYGEVVSAKDPSFISIPASHTYCNNQEEASNYFKPENLSPTTPKATPCELTSHERDSALLRYREKKKTRRYEKHIRYESRKVRAESRMRIKGRFVKDETQKQ 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01669 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 136 208 - -
Viun7g01669 213 Pfam CCT motif 166 208 IPR010402 GO:0005515
Viun7g01669 213 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01669 Viun-Chr7 21497453 21499258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01669 160 207 C2C2-CO-like Transcription Factor Family AT2G33500 66.667 9.02e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun7g01669 CCT 2.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01669 - - vun:114189938 377.481