Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01668 ATGAGTGTTTCTCCCAATCAAAAACAGAGAACATGCGACTATTGTGGGGACTTCACTGCTCTTCTATATTGCAGAGCCGATTCTGCAAAGTTATGCTTTTTCTGTGACCGCAAAGTTCACTTCCAAAACCAGCTTTTCTCCAAGCACTCGCGCACACAGCTCTGTGATGGGTGTGGCGATTCCCCTGCATCGGTGCTCTGTTATTCTGAGAACTCTGTTTTCTGCCACCACTGTGACTTCCAAACACATAACCACCACTTGCTGTCTCACCAACACCAACGGAAACCCCTTCAGGCTTTCTCTGGCTGCCCTTCTGTCACTCAGATGTTAATGATTTTGGGTCTCACTCAAAAATCTCTGCTTTCAACTGAGGGAGCAAGTTCCCATCACGATTTGCACGTGTGGAATGCTCCTTCTGTGTTTGGTCTTCAAGATTTCATCGCTTCCTCTTCTTACAAGAATGGTAAGGGTGCGTGCGGGAGACAGAAAGAAGAGATTCTGAGTCAGCTTCGTGAACTAATAAAGTTGGAGCCTGACTTGATTCATGGAGAAGTAGATGCTGAACCACGACAGCTATTTGAAAATTTGTCTACTGGTTTTGAACGTGACATAGAGACCAATATGTTTCCTTCATACGAGGTGCAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGACCGTGCAAATCAAATTGTTCCTTGTGATACGTCAGTGAGTGATTATGGCGAGGTGGTTTCAGCTAAAGATCCAAGCTTTATTAGCATCCCTGCAAGTCACACCTATTGTAACAACCAAGAAGAAGCATCAAATTATTTTAAGCCTGAAAACTTGTCTCCTACTACTCCTAAAGCTACTCCTTGTGAGTTAACGAGTCATGAAAGAGATTCAGCATTATTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGAGAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGAATGAGAATTAAGGGTCGGTTTGTGAAAGATGAAACACAAAAACAATAG 1029 0.4354 MSVSPNQKQRTCDYCGDFTALLYCRADSAKLCFFCDRKVHFQNQLFSKHSRTQLCDGCGDSPASVLCYSENSVFCHHCDFQTHNHHLLSHQHQRKPLQAFSGCPSVTQMLMILGLTQKSLLSTEGASSHHDLHVWNAPSVFGLQDFIASSSYKNGKGACGRQKEEILSQLRELIKLEPDLIHGEVDAEPRQLFENLSTGFERDIETNMFPSYEVQAGVFCWHGESSDRANQIVPCDTSVSDYGEVVSAKDPSFISIPASHTYCNNQEEASNYFKPENLSPTTPKATPCELTSHERDSALLRYREKKKTRRYEKHIRYESRKVRAESRMRIKGRFVKDETQKQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01668 342 SMART bboxneu5 55 97 IPR000315 GO:0008270
Viun7g01668 342 SMART bboxneu5 7 54 IPR000315 GO:0008270
Viun7g01668 342 CDD Bbox1_BBX-like 12 54 - -
Viun7g01668 342 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Viun7g01668 342 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Viun7g01668 342 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 337 - -
Viun7g01668 342 Pfam CCT motif 295 337 IPR010402 GO:0005515
Viun7g01668 342 ProSiteProfiles CCT domain profile. 295 337 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01668 Viun-Chr7 21497453 21499264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01668 7 310 C2C2-CO-like Transcription Factor Family AT2G47890 35.625 1.30e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Viun7g01668 CCT 4.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01668 - - vun:114189938 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01668 7 21497453 21499264 Viun7g01668 7 21497453 21499264 ECH
Viun1g02696 1 36706080 36710839 Viun7g01668 7 21497453 21499264 PCT