Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01667 ATGAGTGTTTCTCCCAATCAAAAACAGAGAACATGCGACTATTGTGGGGACTTCACTGCTCTTCTATATTGCAGAGCCGATTCTGCAAAGTTATGCTTTTTCTGTGACCGCAAAGTTCACTTCCAAAACCAGCTTTTCTCCAAGCACTCGCGCACACAGCTCTGTGATGGGTGTGGCGATTCCCCTGCATCGGTGCTCTGTTATTCTGAGAACTCTGTTTTCTGCCACCACTGTGACTTCCAAACACATAACCACCACTTGCTGTCTCACCAACACCAACGGAAACCCCTTCAGGCTTTCTCTGGCTGCCCTTCTGTCACTCAGATGTTAATGATTTTGGGTCTCACTCAAAAATCTCTGCTTTCAACTGAGGGAGCAAGTTCCCATCACGATTTGCACGTGTGGAATGCTCCTTCTGTGTTTGGTCTTCAAGATTTCATCGCTTCCTCTTCTTACAAGAATGGTAAGGGTGCGTGCGGGAGACAGAAAGAAGAGATTCTGAGTCAGCTTCGTGAACTAATAAAGTTGGAGCCTGACTTGATTCATGGAGAAGTAGATGCTGAACCACGACAGCTATTTGAAAATTTGTCTACTGGTTTTGAACGTGACATAGAGACCAATATGTTTCCTTCATACGAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGACCGTGCAAATCAAATTGTTCCTTGTGATACGTCAGTGAGTGATTATGGCGAGGTGGTTTCAGCTAAAGATCCAAGCTTTATTAGCATCCCTGCAAGTCACACCTATTGTAACAACCAAGAAGAAGCATCAAATTATTTTAAGCCTGAAAACTTGTCTCCTACTACTCCTAAAGCTACTCCTTGTGAGTTAACGAGTCATGAAAGAGATTCAGCATTATTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGAGAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGAATGAGAATTAAGGGTCGGTTTGTGAAAGATGAAACACAAAAACAATAG 1023 0.434 MSVSPNQKQRTCDYCGDFTALLYCRADSAKLCFFCDRKVHFQNQLFSKHSRTQLCDGCGDSPASVLCYSENSVFCHHCDFQTHNHHLLSHQHQRKPLQAFSGCPSVTQMLMILGLTQKSLLSTEGASSHHDLHVWNAPSVFGLQDFIASSSYKNGKGACGRQKEEILSQLRELIKLEPDLIHGEVDAEPRQLFENLSTGFERDIETNMFPSYEAGVFCWHGESSDRANQIVPCDTSVSDYGEVVSAKDPSFISIPASHTYCNNQEEASNYFKPENLSPTTPKATPCELTSHERDSALLRYREKKKTRRYEKHIRYESRKVRAESRMRIKGRFVKDETQKQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01667 340 SMART bboxneu5 55 97 IPR000315 GO:0008270
Viun7g01667 340 SMART bboxneu5 7 54 IPR000315 GO:0008270
Viun7g01667 340 Pfam CCT motif 293 335 IPR010402 GO:0005515
Viun7g01667 340 ProSiteProfiles CCT domain profile. 293 335 IPR010402 GO:0005515
Viun7g01667 340 CDD Bbox1_BBX-like 12 54 - -
Viun7g01667 340 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Viun7g01667 340 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Viun7g01667 340 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01667 Viun-Chr7 21497453 21499264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01667 7 308 C2C2-CO-like Transcription Factor Family AT2G47890 35.849 1.32e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Viun7g01667 CCT 4.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01667 - - vun:114189938 694.886