Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01650 ATGGGGTCGAAACCGTGGCTCTACCCTGCCTCTACCTATAGAACTTTGGAAACTTTCTGGGATACCGACGAGGACGCGCCTGGTCCTCGTTGTGGGCACACCCTCACTGCAGTTGCTGCCACCAAGACGCAGGGTCCCCGCTTGATCCTGTTTGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCTGGCATTAGGTTAGCTGGAGTCACAAATACGGTTCATTCATATGACGTGCAAACTAGAAAATGGACTAGTCTTAAACCAGCCGGGGAGCCGCCTTCTCCTAGAGCTGCTCATGCAGCTGCTGCAGTTGGTACCATGGTTGTTTTTCAGGGTGGGATAGGACCAGCTGGGCATTCTACTGATGATCTCTACGTGCTTGACTTGACCAACGATAAATACAAATGGCACAGGGTTGTGGTACAAGGGCAAGGCCCTGGACCTCGTTATGGCCATGTAATGGATTTGGTTGCTCAGAGATACCTAGTAACTGTCAGTGGAAATGATGGGAAAAGAGTTGTATCTGATGCTTGGGTTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAATTGAATCCAGAAGGTGACAGACCTTCTGCAAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCCCCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACGGGAGGTGTTCTCAGGGGTGGACGGTCAGTGGAAGGCGAAGCTTCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCCCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTAGTACTCATATATTTATCTATGGTGGACTAAGAGGAGATATATTACTAGATGATTTCTTAGTTGCTGAAAATTCACCATTGCAGTCTGACATTAATTCTGCTGAGAGAGCTTCATCTGTTACAACCTCCAAACCAAGTCAATCTAACTTAAATTATAATGTAACGACCGCGAAGTTGGATGGTGGATCAGACATTCTTTCATCTAGTGGCTCCGGCATGGACAGGAATTCCTTGGAGAAACTTAGGGAAGCATCAGCTGCTGAAGCTGAGGCGGCGACTGCTGTATGGCAAGCTGTGCAGGCCATATCCAGTAGTCCTGCTGAAGAAACATCTGCATCAGATGAGAACTCACAAGCTGCCGAAACTGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCCAAGGAGGCTGTTGGTAACCTGGGTGGAATGGTGAGGCAATTATCGCTAGATCAATTTGAAAATGAAAGCAGACGCATGATTCCCATAAATAATGATTTGCCATATCCTACAAAGAAGTTCACCAGGCAGAAATCTCCTCAGGGATTACATAAAAAGATAATTTCAACTCTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCTAACAGGCGGTTTTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTTAAAGCTCCTGTTAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACTTATATTGACTACCTGTTTTTGGGGGATTACGTTGATCGAGGACAACACAGCTTGGAAACCATTACCTTACTACTTGCTCTCAAGATTGAATATCCAGAGAATGTTCACTTGATACGAGGAAATCACGAAGCTGCTGACATAAATGCATTATTTGGTTTTCGTATTGAGTGCATTGAAAGAATGGGTGAAAATGATGGTATATGGGCATGGACACGATTCAATCAACTTTTTAATTATCTTCCGTTAGCAGCTCTTATTGAAAAGAAAATTATCTGTATGCACGGTGGCATTGGAAGGTCTATCAATTCAGTAGAACAAATAGAGAAGCTTGAAAGACCCATAACAATGGACGCAGGATCTATTATTTTAATGGACCTTCTATGGTCTGATCCCACAGAAAATGACAGTGTAGAGGGTTTGAGACCAAATGCCAGAGGCCCAGGGCTTGTCACTTTTGGTCCTGATCGCGTCACAGACTTCTGTAAGAAAAATAAATTACAGCTCATTATAAGGGCCCATGAGTGCGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAACTAATCACCCTTTTTTCTGCTACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTAGTTGGCAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCTTTACCACCTCCCCTTCAGTCTCCTGAAACTTCTCCTGAGCGTGGTATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGTAGACCTCAACCAGACCTTGACCGTGGTTCACTAGCATATATATGA 2646 0.4562 MGSKPWLYPASTYRTLETFWDTDEDAPGPRCGHTLTAVAATKTQGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHSYDVQTRKWTSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWVLDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRPNKGHDYDPSLELMRRCRHAAAAVSTHIFIYGGLRGDILLDDFLVAENSPLQSDINSAERASSVTTSKPSQSNLNYNVTTAKLDGGSDILSSSGSGMDRNSLEKLREASAAEAEAATAVWQAVQAISSSPAEETSASDENSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPINNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTDFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01650 881 ProSitePatterns Serine/threonine specific protein phosphatases signature. 647 652 IPR006186 GO:0016787
Viun7g01650 881 SUPERFAMILY Metallo-dependent phosphatases 531 842 IPR029052 -
Viun7g01650 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 881 - -
Viun7g01650 881 MobiDBLite consensus disorder prediction 364 385 - -
Viun7g01650 881 Gene3D - 7 193 IPR015915 GO:0005515
Viun7g01650 881 FunFam Serine/threonine-protein phosphatase 9 192 - -
Viun7g01650 881 Gene3D - 194 372 IPR015915 GO:0005515
Viun7g01650 881 SMART pp2a_7 550 836 IPR006186 GO:0016787
Viun7g01650 881 Pfam Serine-threonine protein phosphatase N-terminal domain 529 576 IPR031675 -
Viun7g01650 881 MobiDBLite consensus disorder prediction 436 459 - -
Viun7g01650 881 Pfam Galactose oxidase, central domain 29 96 - -
Viun7g01650 881 SUPERFAMILY Kelch motif 70 357 IPR015915 GO:0005515
Viun7g01650 881 FunFam Serine/threonine-protein phosphatase 195 363 - -
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 714 741 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 774 794 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 796 812 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 578 605 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 613 640 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 684 710 IPR006186 GO:0016787
Viun7g01650 881 PRINTS Serine/threonine phosphatase family signature 646 670 IPR006186 GO:0016787
Viun7g01650 881 PIRSF STPPP_BSU1 1 881 IPR012391 GO:0004721|GO:0009742
Viun7g01650 881 Pfam Galactose oxidase, central domain 115 155 - -
Viun7g01650 881 Gene3D - 513 842 IPR029052 -
Viun7g01650 881 MobiDBLite consensus disorder prediction 436 468 - -
Viun7g01650 881 FunFam Serine/threonine-protein phosphatase 515 854 - -
Viun7g01650 881 Pfam Calcineurin-like phosphoesterase 578 785 IPR004843 GO:0016787
Viun7g01650 881 MobiDBLite consensus disorder prediction 834 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01650 Viun-Chr7 21289748 21302007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01650 579 777 Calmodulin-binding Proteins AT5G63870 33.043 3.03e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01650 K01090 - gmx:100805538 1680.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01650 7 21289748 21302007 Viun7g01650 7 21289748 21302007 ECH