Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01639 ATGACTCCTCTCAGCCCCTTCATCTTCTTCTTCTTCTTCCTTTCTCTTCCGTTCTCCTCCTTATCCGCCACCTGTCCCCTGAACTTCACCGTCCTCGGCAAGACCAAGCCCTCCTCCTTCGACTCCTCCCGGTGCCAGGTCATCAGCCAGGCCCTCCGCCTCGTCCAGTCGGAGTACCTCCGGCGCAGCGGCTTCTTCCTGGCTCCCTCCAACGCCTCCGACTCCTGCTGGCAAAGCTTCCAGTCCTACGTTAACCACTTCGACCCCACCTACAACATTCGCTCCTCCTGCGGCTACCAAACCTCGTGGATCTCCCAAGGCTGCATCAACGTCACCACCAGACAAGAGTTTGAAGCCCTGGTTCCCCAAACCGCGCTTCAGACCTTGGTAAAAAACTGCAACCAATCGCTCGAGAATAACGCCCCCTGCGCCCTCTGCACCTCCTCCTTCTCCGGTATCCCACACTTGGGACGCTCCGTCGGCAACCTCACCAGCTGCACTGACTACTCTTCTATCTACGCCGCCGCCTTTGCCAATTCCCTCGGCCCCTCCGACACCGGCACCCGCAAGTGCTTGTTCGCCCTCGAATTTCCCTCCGCCGGCTCCTCCGCCTCCAAAAGAAGAAAGCTTCTTTTTGGGCTTGTTTCTGTTGTCTGTGTCTTGGTCTTCTGCCTGCTGGCTCTCGGCTTTTGGGCTTATCGCAAGTTTGAAAAGAAGGCGGCTCGGGATAGGGATGTTCGTGTTGCGGAAACCGTTTTGGTTTCTGGGTTGGACTCCATGGACCAGAGCACCACTTTGATCAGGTTCACTTTCGATGATATTAAGAAAGCTACTAAGAATTTCTCCCGGGATAACATAGTTGGAAGAGGGGGTTACGGGAATGTGTACAAAGGGTTGCTTCCTGATGGGAGTGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCGGCTGCTGGTGATGCCAGCTTTACTCATGAGGTTGAGGTTATTGCTAGCGTGAGGCATGTTAACCTTGTTGCCCTGCGAGGTTATTGTTCTGTGACCACTCGTTTAGAGGGTTACCAGAGGATCATTGTGTGTGATATGGTGAAAAACGGGAGTCTCCACGACCATTTGTTTGGTTCCAATGGGGTGAAACTGAGTTGGCCAATTCGTCAGCAGATTGCTCTAGGCACCGCTAGAGGGCTGGCTTATTTGCATTATGGGGCTCAGCCTGCAATCATTCATAGGGATATTAAAGCAAGTAATATACTTTTGGATGATAAATTTGAAGCCAAGGTTGCAGATTTTGGACTGGCGAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGGGTGGCTGGAACCATGGGGTATGTTGCTCCGGAATATGCTTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGCGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAAGCGCTTCAGATGAACAATGATGGTCAACCATCTGCTTTAACCGATTGGGCATGGTCATTGGTTAGAACAGGAAAGGCTTTGGATGTAATTGAAGATGGCATGCCACAACCTGGTTCACCGCAAGTTCTTGAGAAGTATGTGTTAATTGCTGTGCTTTGTTCTCATCCACAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAAACTGATGAATCAGTGCCCTCAATACCTGAACGCCCAATCCCTTTTGTTGCTGGGAGGCTCGATATCGATAGGTCTGTGAGCAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCAAGCATATACTCTTGAAAGTGATAGCCAGGTAACTAATTCTAGGGAAGAAAGAAGCTCCAGCTCCAGGGTTTTGTGTACAGATTGA 1875 0.5056 MTPLSPFIFFFFFLSLPFSSLSATCPLNFTVLGKTKPSSFDSSRCQVISQALRLVQSEYLRRSGFFLAPSNASDSCWQSFQSYVNHFDPTYNIRSSCGYQTSWISQGCINVTTRQEFEALVPQTALQTLVKNCNQSLENNAPCALCTSSFSGIPHLGRSVGNLTSCTDYSSIYAAAFANSLGPSDTGTRKCLFALEFPSAGSSASKRRKLLFGLVSVVCVLVFCLLALGFWAYRKFEKKAARDRDVRVAETVLVSGLDSMDQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQQIALGTARGLAYLHYGAQPAIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTGKALDVIEDGMPQPGSPQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPIPFVAGRLDIDRSVSSSGSGQLSSPTGYQAYTLESDSQVTNSREERSSSSRVLCTD 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01639 624 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 112 610 - -
Viun7g01639 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Viun7g01639 624 Gene3D Phosphorylase Kinase; domain 1 246 360 - -
Viun7g01639 624 SMART serkin_6 281 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01639 624 ProSiteProfiles Protein kinase domain profile. 281 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01639 624 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 362 563 - -
Viun7g01639 624 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 241 360 - -
Viun7g01639 624 Pfam Protein kinase domain 282 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01639 624 SUPERFAMILY Protein kinase-like (PK-like) 263 572 IPR011009 -
Viun7g01639 624 Pfam SPARK 21 154 IPR043891 -
Viun7g01639 624 CDD STKc_IRAK 287 556 - -
Viun7g01639 624 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Viun7g01639 624 Gene3D Transferase(Phosphotransferase) domain 1 362 563 - -
Viun7g01639 624 MobiDBLite consensus disorder prediction 581 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01639 Viun-Chr7 21171916 21174660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01639 8 610 Receptor kinase-like Gene Family AT2G48010 62.500 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Viun7g01639 Pkinase 7.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01639 - - gmx:100794233 1025.39