Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01622 ATGATTCCTTGGGGTGGCCTTAGTTGCTGTTTGAGTGCTGCTGCTCTTTATCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAAATTCTTAAATCGGTTACGAGGGTCAATCAGTTGAAGGAACTGGCTCAACTGTTAGATGCTGAAATATTACCCTTGATTGTTACAATTTCTGGAAGAGTTGCCTCTGAAACCCCAATTAACTGTGAGTTCAGTGGTTTAAGAGGCGTTATAGTTGAAGAAACAGCAGAGCAGCATTTTCTCAAGCACAATGATGCTGGTTCCTGGATACAGGATTCTGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGAGTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAAAGGGTACTTCCTATTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGTCCATTCGAATTCAGCGACCTCACAAAGGACCATTTTATGTCTCTCCCAAAACAATTGATCAACTAATTGCAAATCTGGGAAAATGGGCAAGGTGGTATAAGTATGCCTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCTAAGCATGCTATTGGGTACATATTGGAAAGACGGCGCCGCAGCGAACTACAAAGAAGGGTTCTTGCTGCTGCTGCTGCGAAGAAGTCAGGATCAAATAATGATGTTGAAAAAGCGGACAGCTTATCAGATGTTGCTAAAAGGGATCGCTTAATGCCGGATTTGTGTGTAATATGCCTTGAACAGGAATACAATGCTGTTTTTGTTCCGTGTGGCCATATGTGTTGCTGTACAGCTTGTTCATCACACTTAACCAATTGCCCTCTTTGCCGGCGCCAGATAGAGAAGGTTGTCAAGACTTTCCGTCATTGA 1023 0.4457 MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLIVTISGRVASETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSDRVHVVGARGATGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDVGSIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIGYILERRRRSELQRRVLAAAAAKKSGSNNDVEKADSLSDVAKRDRLMPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01622 340 CDD RING-HC_LRSAM1 293 336 - -
Viun7g01622 340 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
Viun7g01622 340 FunFam E3 ubiquitin-protein ligase SP1 281 339 - -
Viun7g01622 340 Pfam Zinc finger, C3HC4 type (RING finger) 291 334 - -
Viun7g01622 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 339 IPR013083 -
Viun7g01622 340 PANTHER - 1 307 IPR044231 GO:0004842|GO:0016567
Viun7g01622 340 SUPERFAMILY RING/U-box 292 334 - -
Viun7g01622 340 FunFam Baculoviral IAP repeat containing 7 302 338 - -
Viun7g01622 340 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01622 1 265 C3H Transcription Factor Family AT1G63900 78.652 9.64e-155 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01622 K15688 - gmx:100803252 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01622 7 20948821 20953931 Viun7g01622 7 20948821 20953931 ECH