Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01564 ATGCCAAACACGAGAAATCTGAGGCACCTCAACCTCAACATGTGCTGCTCAAACTCAGCTACTCCTGACTCAGAAACTCCACCATTGAGCCCCATTACTACTTCCTCACATCACAACATTCACTCTGCATCTCCTTCTTCCATTATGATAAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTAACAACTCTTTCACCTCCACTTTCTTCTCCACCACCACCTTCTTCGAACCAGAACCCGAACCTCAACCCGCCGACTTCGCCACCGCTTGTGCCTCCCAGAGGTTCTTCTTCTCCTCTCCCGGCCACTCAAACTCCCTCCTTCAATACACCAACAAAGCCACCCAACACCACTCGCCGTCGCTGAGAGAAGATGGCGCTGATGTTGAGAAGACGAAGATGAATAAGAAGGTGCCGTTCAAGGGGAGCGTGGCGGTGGCCACGTACTCGCCGGACCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTGATGGACGTGAAGTCGAACTGGAATGTGTTGCACGAGCTTCTTCTCTGCTATCTTGCGCTCAACCCAAAGAACACCCACAAGTTCATTCTTGGTGCTTTTGCTGATCTCCTCGTTAGCCTCATGTCTTTCTAG 651 0.5161 MPNTRNLRHLNLNMCCSNSATPDSETPPLSPITTSSHHNIHSASPSSIMIKNFNSIYDPTLTSNNSFTSTFFSTTTFFEPEPEPQPADFATACASQRFFFSSPGHSNSLLQYTNKATQHHSPSLREDGADVEKTKMNKKVPFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKNTHKFILGAFADLLVSLMSF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01564 216 Pfam Transcriptional repressor, ovate 152 213 IPR006458 -
Viun7g01564 216 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 213 IPR038933 GO:0045892
Viun7g01564 216 MobiDBLite consensus disorder prediction 18 40 - -
Viun7g01564 216 NCBIfam uncharacterized plant-specific domain TIGR01568 146 214 IPR006458 -
Viun7g01564 216 ProSiteProfiles OVATE domain profile. 148 212 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01564 Viun-Chr7 20193357 20195553 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun7g01564 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01564 - - gmx:102660213 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01564 7 20193357 20195553 Viun7g01564 7 20193357 20195553 ECH
Viun1g02007 1 31527918 31528988 Viun7g01564 7 20193357 20195553 PCT