Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01536 ATGGGTAGTGTAGATCACGAGAGTGTTCAGCAGCAGCAGGTAGAAGTTCCTCCGCACCAACCCTTCTTCAAGTCTCTAAAAATGACCTTGAAGGAGACCTTCTTCCCAGATGATCCTTTGAGACAGTTCAAGAACAAACCACCCTCCAAGAAGTTGATGCTTGGTATTCAGTATTTCTTCCCCATCTTCCAATGGGCACCCAAATACACCTTCAACTTCTTCAAAGCTGATCTCATAGCTGGCATCACCATAGCTAGCTTGGCCATTCCCCAAGGCATCAGCTATGCCAAGCTCGCCAACCTCCCTCCTATCCTCGGACTATATTCAAGCTTTATACCACCTTTGATTTATGCCATGATGGGAAGCTCCAGGGATTTGGCGGTGGGGACGGTGGCGGTTGGATCGCTTCTCATGGGTTCCATGTTGAGTGATGTGGTTAATCCCAATGAAGACCCAATCCTTTACCTGCACCTTGCTTTCACTGCTACATTATTTGCTGGAATTTTTCAGGCTGCTTTGGGTTTGTTTAGGTTGGGGTTGATAGTTGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGTGGAGCAGCTACAGTGGTTTGTCTGCAGCAACTAAAATCGATTCTTGGTCTTGTGCATTTCACCCATGGAGCTGATATCATATCAGTGATGCGCTCTGTTTTCACCCAAACTCATGAGTGGAGGTGGGAAAGTTCTGTGTTAGGATTTGTCTTCATCTTCTTCCTCCTTATCACTAGATACTTTAGCAAAAAACAACCAAGGTTTTTTTGGGTGTCAGCAATGGCGCCGTTAACATCGGTTATATTGGGAAGTGTGTTAGTTTATTTCACTCATGCTGAGAAGCACGGAGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCAGCATCAGTAACAAAGCTGGTTTTTGTGTCACCTTATATGACCACAGCTGTGAAAACTGGCATTGTTGTTGGCATCATATCACTAGCAGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGCAACAAAGAGATGATAGCTATTGGTACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCACGCTCAGCGGTGAACTATAATGCTGGATGCAAGACAGCAGCTTCCAACATTATAATGTCAATTGCAGTGATGTTAACATTGCTATTCCTCACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTGTCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATTCATCTGTGGAAGATTGACAAATTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTGTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCTGTTGCAATTTCTGTGCTTCGAGTACTGCTATTCATTGCAAGGCCAAGGACATTCGTTTTGGGAAATATTCCAAATTCTGGGATTTACAGAAATGTTGAACAATATCCAAATGCAAAACATGTTCCTGGAATCCTCATCCTAGAAATTGATGCACCCATTTACTTTGCCAATGCAGGCTATTTACGAGAAAGGATCACAAGGTGGATTGATGAAGAAGAAAACAGAATCAAAGCTACTGCAGAGACAAGTTTGCAGTATGTTATAATGGATATGAGTGGTGTTGGAAACATCGATACAAGTGGAATAAGTATGCTCGAAGAGGTGAAGAAGATTACTGAGAGAAGAGAACTTCAACTTGTATTGGTGAATCCTGGAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGACAGAGATGGATCTATCTAACTGTTGAAGAGGCCGTTGGAGCATGCAACTTCAATCTCCGTGCCAGAACGAATCTCAAGATTGATGAATCAGAGAATTGGGATAATGTTTGA 1950 0.4262 MGSVDHESVQQQQVEVPPHQPFFKSLKMTLKETFFPDDPLRQFKNKPPSKKLMLGIQYFFPIFQWAPKYTFNFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDVVNPNEDPILYLHLAFTATLFAGIFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQTHEWRWESSVLGFVFIFFLLITRYFSKKQPRFFWVSAMAPLTSVILGSVLVYFTHAEKHGVEVIGELKKGLNPASVTKLVFVSPYMTTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFVLGNIPNSGIYRNVEQYPNAKHVPGILILEIDAPIYFANAGYLRERITRWIDEEENRIKATAETSLQYVIMDMSGVGNIDTSGISMLEEVKKITERRELQLVLVNPGSEVMKKLNKSKFQNHLGQRWIYLTVEEAVGACNFNLRARTNLKIDESENWDNV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01536 649 Gene3D STAS domain 485 631 IPR036513 -
Viun7g01536 649 ProSiteProfiles STAS domain profile. 505 628 IPR002645 -
Viun7g01536 649 NCBIfam sulfate permease 61 624 IPR001902 GO:0016020|GO:0055085
Viun7g01536 649 FunFam Sulfate transporter 31 485 631 - -
Viun7g01536 649 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Viun7g01536 649 Pfam Sulfate permease family 74 454 IPR011547 GO:0016020
Viun7g01536 649 Pfam STAS domain 506 624 IPR002645 -
Viun7g01536 649 SUPERFAMILY SpoIIaa-like 508 628 IPR036513 -
Viun7g01536 649 CDD STAS_SulP_like_sulfate_transporter 506 621 - -
Viun7g01536 649 PANTHER SULFATE TRANSPORTER 23 631 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01536 Viun-Chr7 19808963 19814847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01536 10 645 Inorganic Solute Cotransporters AT4G02700 66.458 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01536 K17471 - gmx:100810196 1169.84