Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01513 ATGATTTCGAAGATTCCGTCGGAGTACCTGACCCTCGCGTTAGGGTTTCTGTTTTTCGTCACACTCCCTTTCGTTCACGCCGAGTCGTCAACGTGCTTGACGGTATATAAGAATGGCGGTGCTCCGGCGGTGTTTCAGTCCCCAAAATGTCCTCTCTGGAAACTCTCCGACTATGATTCAATTCCCAAAAGCACGGCGCGTTGCCAGATTGCGATGCTCCAAGGCCGCAGAGAATCTCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTTCCTGGTGTGAACGGGATCAAGGAAGTTGCGGTTGACATCGTGGCCGTCTTCGACGGTCACAACGGTGCAGAAGCGAGTGAGATGGCATCCAAACTTTTATTGGAGTATTTTGTTCTGCATACTTATTTTCTCCTTGATTCTGCCTTTTCCCTCCTTTCGAAGACGTCAACAGAACCATCACTTCGTGATAATGCAAACTTACTGCATAGATGGGAGGAGATTCCAGGTTCAAAATGGCATGGACTGCATTTTGAAAGGTTTCAGAATACATTTACTTCAAATTTTGATGATTCTGTACACTTGGAAATTTTGAAAGAAGGGTTATTGAGAGCCGTTCATGACATTGATGCTAAATTTTCTGAGGAAGCCTCTAAAAATAATTTTCACTCTGGATCAACAGCTACCATTGCTTTGGTAGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATATTGTGCTCTAAAAATTTTCAGTCTCCCAAAGAGGCCAAAGACTTTTTATTAAAGCTATATAGACAGAAAGAACATGGTGGTTCTGTTTCCGTGTGGGATCGGGAAAAGTACAAACTGGCTTCATCCCATGGTCTCACTCATTTTGCAGTAAAGGAATTGACTAGTGATCATCATCCAGACAGAGATGATGAAAGAAATCGGGTGGAAACAGCTGGAGGTCAAATTCAAAATTGGAGTGGTGTGCCTCGCGTAAATGGTGAACTTGCTATTACACGGTCTATTGGTGACCTATCCTTTAAAAGGTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTATTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGACGAGCTTGCAGGATGTCTGTGATTTGTTGTGGGAAGTGCATAGTTACAGTAACATGAGATCAGAGTGCGCCCATTCTTCCTATTCGTTGGCAGATTTAATTGTTAATAATGCCTTAAAAAAGGGCAGTATGGACAATGTGGCAGCCATTGTCATTCCTCTGGAGTCTGTCAATTCCTCAGCAAACTCGCTTAGGGGAAGCTATATTGGTCTGCAAGAATCTTCCTTCAAAAGCTCAGTTAATGGCATCTCGTCTGATCTTATGCACTTGGAGCACCCTCATCTAGTAGATACCAAGTTCAAGCGAATATTGGTTGAAGTGAAAGATGGTGATTTTGGCTGCTTTTATTTATCTGAAAATCTTGATGAACCAGAGGACTCCAAGCAGATTGCCAAAAAAACTGACTGGGATGACTATTTGTATGAACTACCTCCGCCTCCACCAGATTCCCTTTCTCATCATGCCCCATCAGGTGGTCTTGTAGATTTATACAATAACCAGAACTTTTGCTTTGACTATGGTCCAACTGTTAATGAAACTGAAGGCCGATGCATAAATCCTGAAGGTTTTGCTAGTTTCATTGGTCTTCTTGAATCAATTCCTTTAAATGATACTGATGCCAGCAATGGATCTTCTGATTATTCAATGCCTGATTTGAGGTATGTGTTGAAGAAGAGTTTTGGACGTGGATCATTTGGTGAAGTGTGGTTGGCTTTTCATTGGAACTGTAATCAAGATAGTAATGCTGCAAAAGGGAGCAGGGATGATACAAATACAAACAACAGAACAACTGCTTCTGATTGTCAGAACGGTCCTTCTAATTACACCCTGTACATTTTGAAACGTATAATGGTGGAGAAGGGGTCATCTGTTTACTTGAGTGGTCTAAGGGAGAAGTACTTTGGAGAAGTTTTTTTAAATGCCTCTACATGTTTTGAAGATCCACTCTCGGCTGGAAAATCAACCTGTGTCTTGGAATCATCATCACAATTTGGTCCTGAGAATTCATTCCCAAACAAATTTCGTGTACAAAGAACCCTTTATGAAGAAGGCTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCAGGCGAACGAAATTTGGCTTGTATTTAGTTTTGAAGGTGTGTCACTCTCAAAACTTCTATATTCAGTGGAAGATGCATATGGTTCTGATGAGCAAGAAAGACTTGAGCAAGCTAAACAAGTTCAGATACTACGACCCTCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGACAGGAAGAAATGCGCAACCTTATCAGGCAGCTGTTATTAGCTCTCAAATCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTCTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATACACATTAAATAATTTGTATGGTTCTACTGGGCCTTCGAGAGCTGAGCAAACCTATGAGTATACTCCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGCCAACAAGCTCGACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGCACACCAGATGTTTTTCAGATAAATGCTTTAACACGGACTCTATTAGATCAACATCTAAAAGGCTGGAATGAGGGTGTGAAGGAGTTGGCATACAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGGTCTCCGGGTCGAGCAGTTTCTCAAAAAAGTATCACACAGTGAACAAAGTTGGAGTTTCACTTGCATCTTGGAAATGCTCTGAAGAATTCATTACTCGTCAAATTAAGAATCGAGATCCGCTAAAGATAGGTTTTTCAGACATCTGGGCTTTCCGGTTAGTGCGCCGTTTGTTACATTGGGATCCGGAGGATCGGCCAAGTATTGATGAGGCTCTTCAACATCCTTATTTCCAACATCCCCGTAGAGAGTGA 3189 0.4174 MISKIPSEYLTLALGFLFFVTLPFVHAESSTCLTVYKNGGAPAVFQSPKCPLWKLSDYDSIPKSTARCQIAMLQGRRESQEDRALCVLDVRIPFPGVNGIKEVAVDIVAVFDGHNGAEASEMASKLLLEYFVLHTYFLLDSAFSLLSKTSTEPSLRDNANLLHRWEEIPGSKWHGLHFERFQNTFTSNFDDSVHLEILKEGLLRAVHDIDAKFSEEASKNNFHSGSTATIALVADDKILVANIGDSKAILCSKNFQSPKEAKDFLLKLYRQKEHGGSVSVWDREKYKLASSHGLTHFAVKELTSDHHPDRDDERNRVETAGGQIQNWSGVPRVNGELAITRSIGDLSFKRYGVISAPEVTDWQPLTANDSYLVVASDGVFEKTSLQDVCDLLWEVHSYSNMRSECAHSSYSLADLIVNNALKKGSMDNVAAIVIPLESVNSSANSLRGSYIGLQESSFKSSVNGISSDLMHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEDSKQIAKKTDWDDYLYELPPPPPDSLSHHAPSGGLVDLYNNQNFCFDYGPTVNETEGRCINPEGFASFIGLLESIPLNDTDASNGSSDYSMPDLRYVLKKSFGRGSFGEVWLAFHWNCNQDSNAAKGSRDDTNTNNRTTASDCQNGPSNYTLYILKRIMVEKGSSVYLSGLREKYFGEVFLNASTCFEDPLSAGKSTCVLESSSQFGPENSFPNKFRVQRTLYEEGLNHIARYVESFESQANEIWLVFSFEGVSLSKLLYSVEDAYGSDEQERLEQAKQVQILRPSKWWHWLKTTEEGQEEMRNLIRQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNSSTKMRIIDFGSGIDEYTLNNLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPDVFQINALTRTLLDQHLKGWNEGVKELAYKLRSFMELCILIPGVSGSSSFSKKYHTVNKVGVSLASWKCSEEFITRQIKNRDPLKIGFSDIWAFRLVRRLLHWDPEDRPSIDEALQHPYFQHPRRE 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01513 1062 Gene3D Transferase(Phosphotransferase) domain 1 794 1057 - -
Viun7g01513 1062 SMART PP2C_4 59 434 IPR001932 -
Viun7g01513 1062 MobiDBLite consensus disorder prediction 304 323 - -
Viun7g01513 1062 MobiDBLite consensus disorder prediction 304 318 - -
Viun7g01513 1062 ProSiteProfiles PPM-type phosphatase domain profile. 67 436 IPR001932 -
Viun7g01513 1062 FunFam uncharacterized protein LOC106771884 isoform X8 794 1057 - -
Viun7g01513 1062 SUPERFAMILY Protein kinase-like (PK-like) 602 1058 IPR011009 -
Viun7g01513 1062 SUPERFAMILY PP2C-like 64 438 IPR036457 -
Viun7g01513 1062 Pfam Protein phosphatase 2C 104 429 IPR001932 -
Viun7g01513 1062 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Viun7g01513 1062 Pfam Protein kinase domain 804 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01513 1062 Gene3D - 62 443 IPR036457 -
Viun7g01513 1062 ProSiteProfiles Protein kinase domain profile. 603 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01513 1062 CDD PP2Cc 74 436 IPR001932 -
Viun7g01513 1062 PANTHER PROTEIN PHOSPHATASE 66 435 IPR015655 GO:0004722|GO:0006470
Viun7g01513 1062 SMART serkin_6 603 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01513 Viun-Chr7 19627968 19651338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01513 667 1059 PP2C-type Phosphatase Gene Family AT3G63340 63.868 1.16e-169 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Viun7g01513 PP2C 1.1e-38 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01513 - - vum:124828073 1899.02