Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01512 ATGAATTATATGTATCCGGTGAAAGAAGAATGCTTGGAATCATCATCATCATATCAGTTAGGTAATGAGTATCCACCAAAGCCAATTGAGGGACTTCATGACACTGGACCACCACCATTCCTCACCAAAACTTTTGATGTTGTTGATGACCCAGTTACCAACCATGTAATTTCATGGAGCAGAGACGGCACAAGCTTTGTGGTCTGGGATCCACATACCTTCTCTGCAACTCTCCTTCCCAGATACTTCAAGCACAACAATTTCTCAAGCTTTGTCAGGCAACTAAACACTTACGGTTTTAGGAAAATTGATCCAGATAGATGGCAGTTTGCAAACGAAGGATTCATCAGAGGGCATAAGCATTTGTTAAAAAGCATAAGGAGAAGGAAGGCACCTTCCCAACTAACACAAAGTCACCACAGTGTTGAAGTTGGACGTTTTGAATTAGACCAAGAGGTTGATCGTTTGAAGCACGAGAAGATAGTGTTGATGATGGAGCTTATGAATCTAAGACAGCAGCAGCAGAAAGCCAGAATGTGCATTAAGGAGATGGAGCAAAGGTTACAAGTGACTGAAATCAAGCAGAAACATACGATGGCATTCTTAGCTAGAGCTATAAAAAATCCTGCCTTCATACACCAACTCCAACAGAAAGAGAAGAGAAAGGATCTTGAAGAAGCCTTGACTAAAAAGAGAAGACAAATTGAGCAAGGAGTTAGAGGTATTGGAGAATCAAGTAGTAGGGGTGAAGGAAGGAGCAGTGTTAAAGTTGAGGCCTTGGAATTTGGGGAGTGCGATTGTGATTTTGGAGTGTCAGAGTTGGAAAAGTTAGCTATGGAAATGCAGGGATTTGGAAAGGGTAGGATGGAGCAGGAGGTAGAACCTGAGGCACTAGAATCACAAGAGAGATTGGATAGAGTACTTGATGAAGAGTTTTGGGAAGAACTGCTGTTGAGTGAGAAATTTGAGGGTCGATTTGACATTCCAACTACTGAAGATAACGATGAAGATGTTGTCAACATATTGGCCAATGAACTTGGTTGCTTGGATTCAAGTCATTAA 1062 0.4153 MNYMYPVKEECLESSSSYQLGNEYPPKPIEGLHDTGPPPFLTKTFDVVDDPVTNHVISWSRDGTSFVVWDPHTFSATLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWQFANEGFIRGHKHLLKSIRRRKAPSQLTQSHHSVEVGRFELDQEVDRLKHEKIVLMMELMNLRQQQQKARMCIKEMEQRLQVTEIKQKHTMAFLARAIKNPAFIHQLQQKEKRKDLEEALTKKRRQIEQGVRGIGESSSRGEGRSSVKVEALEFGECDCDFGVSELEKLAMEMQGFGKGRMEQEVEPEALESQERLDRVLDEEFWEELLLSEKFEGRFDIPTTEDNDEDVVNILANELGCLDSSH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01512 353 Gene3D - 32 130 IPR036388 -
Viun7g01512 353 Coils Coil 214 234 - -
Viun7g01512 353 FunFam Heat shock transcription factor 1 33 130 - -
Viun7g01512 353 Pfam HSF-type DNA-binding 40 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun7g01512 353 Coils Coil 153 187 - -
Viun7g01512 353 ProSitePatterns HSF-type DNA-binding domain signature. 79 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun7g01512 353 SUPERFAMILY "Winged helix" DNA-binding domain 36 129 IPR036390 -
Viun7g01512 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 241 IPR027725 -
Viun7g01512 353 SMART hsfneu3 36 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun7g01512 353 PRINTS Heat shock factor (HSF) domain signature 78 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun7g01512 353 PRINTS Heat shock factor (HSF) domain signature 40 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun7g01512 353 PRINTS Heat shock factor (HSF) domain signature 91 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01512 Viun-Chr7 19609730 19612423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01512 26 352 HSF AT3G22830 49.725 1.59e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Viun7g01512 HSF_DNA-bind 2.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01512 K09419 - gmx:100811945 555.829