Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01503 ATGATTGATCATTATAAGAGTGAGAAGAGTGCGTGTTTAGAAACGATGAATCACCTACCGTCGAACCTGTTGCCGGATGAAGGAAGCCCGGAATGGATGAACAAGGGAGACAACATGTGGCAGTTAACGGCGGGCACTCTGGTGGGCCTGCAAAGTGTTCCGGGCCTGGTCATCCTCTACGGCAGCATAGTCAAGAAGAAATGGGCTTTGAACTCTGCGTTCATGGCCCTCTACGCTTTCGCGGTGGTTCTTGTTTGCTGGGTTGGGTGGTGCTATCAAATGTCCTTTGGTGAAAGGATTCTTCCATTTCTGGGACGTCCAAACGTGGCTTTAGACCAACAATTCCTTCGGGACAAAGCCTTTTCCGGCGATTTTCCCAACGCCACTATGGTGTACTTTCAGGTCGTCTTTGCAGCCATCACGTTGATTCTCATCGCCGGGGCGTTGCTCGGGAGAATGAACTTCTACGCTTGGATGTTATTCGTTCCCCTTTGGGTCACCTTCTCTTACACCGTCTGCGCCTTCAGTATATGGAGCCCCGCTGGATGGTTGTTCAAAATGGGCCTCATTGATTACTCCGGTGGCTTTGTTATTCACCTTTCTTCTGGGATTGCTGGTTTCATCGCAGCATCTTGGGTAGGGCCAAGGACAGTGAAGGATAGAGAGAGGTTTCCTCCAAACAACATACTTCTGATGCTGGCTGGGGCTGGTCTACTATGGATGGGGTGGACCGGATTCAACGGTGGAGATCCATACGCAGCCAGCATAGATGCATCTCTGGCCGTTCTCAACACCCATGTCTGCACGGCCATGAGTTTGTTGACATGGCTTTTCCTTGATATCCTCTTCTTTGGAAAACCTTCAGTGATTGGTGCCACTCAAGGAATGATCACTGGTTTGGTCTGCATAACCCCTGCGGCAGGTGTGGTGCAAGGTTGGGCAGCAATGATAATGGGAATTATGTCGGGAAGCATCCCGTGGTACACAATGATGGTTCTTCACAAAGAGATTAGGCTCCTGAAACAGGTGGATGATACCATGGCGGTTTTCCACACTCATGCAGTGGCCGGTTGCTTAGGTGGTATTCTGGCTGGTTTCTTTGCTGACCCTGACCTTTGCCGTCTCTTCTATGGGGTAGAGGATTCGGTGCACTACACGGGCCTTGTTTATGGCATATTCAGAGGGAGGCCTAAGGCAGGGTTGAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTGTTTGTAACACTTCTGAATGTCACCACAACCAGCATTGTGTGTTTGGTTGTTAAGACCATTGTTCCACTTAGGTTGCAGGAAGATGAGTTGGAAGTTGGAGATGATGCGGTGCATGGTGAGGTTGCGTATGCATTGTGGGGTGATGGAGAGAGGCTTGAGACTGCCACTGAGGCTGTGAGTTTTGAGATGAATCATGAATGGCCTACTGTTGATGTAAAAACTTCCACTGATGCAGAAATGGAGTGA 1482 0.4973 MIDHYKSEKSACLETMNHLPSNLLPDEGSPEWMNKGDNMWQLTAGTLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAVVLVCWVGWCYQMSFGERILPFLGRPNVALDQQFLRDKAFSGDFPNATMVYFQVVFAAITLILIAGALLGRMNFYAWMLFVPLWVTFSYTVCAFSIWSPAGWLFKMGLIDYSGGFVIHLSSGIAGFIAASWVGPRTVKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYAASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAMIMGIMSGSIPWYTMMVLHKEIRLLKQVDDTMAVFHTHAVAGCLGGILAGFFADPDLCRLFYGVEDSVHYTGLVYGIFRGRPKAGLRQMGVQLLGIVFVTLLNVTTTSIVCLVVKTIVPLRLQEDELEVGDDAVHGEVAYALWGDGERLETATEAVSFEMNHEWPTVDVKTSTDAEME 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01503 493 SUPERFAMILY Ammonium transporter 32 437 - -
Viun7g01503 493 Pfam Ammonium Transporter Family 40 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
Viun7g01503 493 PRINTS Rhesus blood group protein signature 134 150 IPR002229 GO:0005886
Viun7g01503 493 PRINTS Rhesus blood group protein signature 230 248 IPR002229 GO:0005886
Viun7g01503 493 PRINTS Rhesus blood group protein signature 316 334 IPR002229 GO:0005886
Viun7g01503 493 PRINTS Rhesus blood group protein signature 261 283 IPR002229 GO:0005886
Viun7g01503 493 NCBIfam ammonium transporter 37 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Viun7g01503 493 Gene3D Ammonium transporter AmtB like domains 22 474 IPR029020 -
Viun7g01503 493 PANTHER AMMONIUM TRANSPORTER MEP2 21 466 IPR001905 GO:0008519|GO:0016020|GO:0072488
Viun7g01503 493 FunFam Ammonium transporter 22 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01503 Viun-Chr7 19409448 19411959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01503 128 478 Inorganic Solute Cotransporters AT2G38290 59.259 2.20e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01503 K03320 - gmx:112999382 839.336