Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01468 ATGGTGTTTGAGGAAACTGAACTCAGGCTCGGACTTGGACTACCTGGGAATGGAGCCACTGCAACTGAACCACCACCAGCAGCAGCAGCAGCAGAAGGAGTGAGAAAGAGAGGGTTCTCTGAAACTGAGACTGAAACAACCACCGTTGATTTGAAGCTTAACCTCTCCCCAAAGGAAGTTTCTTCTGCTGATGGAACAGATCCACGTAATAAGCCAAACACTTCGCCTAAGGAGAAAACCCTTTTGCTTCCCGATCCCGCCAAACCTCCTGCTAAGGAGCAAGTTGTGGGATGGCCACCAGTGAGGGCTTTCAGGAAGAACATGTTTGCAGCACAAAAGAAGATGGTAGAGGAAAGTGAGAAGAATAACAGCCCTAATGCAAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTATCTCCGCAAAGTGGACTTGAAGATGTACAACAGTTACCCACAACTCTCTGATGCCTTGGGAAAAATGTTTAGCTCTTTCACCATTGGAAATTGTGAATCCCAAGGCTTTAAGGATTTCATGAATGAGAGCAAGTTGATGGATCTTTTGAACAGCTCTGACTGTGTCCCAACCTATGAAGACAGGGATGGTGACTGGATGCTTGTCGGTGATGTTCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAGGAAGCCATTGGACTGGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTAG 738 0.4661 MVFEETELRLGLGLPGNGATATEPPPAAAAAEGVRKRGFSETETETTTVDLKLNLSPKEVSSADGTDPRNKPNTSPKEKTLLLPDPAKPPAKEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01468 245 Gene3D - 119 239 - -
Viun7g01468 245 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
Viun7g01468 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 232 IPR003311 GO:0005634|GO:0006355
Viun7g01468 245 FunFam Auxin-responsive protein 122 237 - -
Viun7g01468 245 MobiDBLite consensus disorder prediction 44 70 - -
Viun7g01468 245 MobiDBLite consensus disorder prediction 1 94 - -
Viun7g01468 245 Pfam AUX/IAA family 5 236 IPR033389 -
Viun7g01468 245 SUPERFAMILY CAD & PB1 domains 117 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01468 Viun-Chr7 19036245 19038574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01468 120 230 B3 DNA Binding Superfamily AT3G61830 31.532 5.55e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun7g01468 AUX_IAA 5.6e-81 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01468 K14484 - gmx:100780214 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01468 7 19036245 19038574 Viun7g01468 7 19036245 19038574 ECH