Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01467 ATGGAGAATTCATTGGGAAGCTATGAAAAAGAACTTAATCTGAAGGCCACAGAGCTGAGATTGGGGTTGCCCGGTAGCGATGAGCCTGAGAAACGTTCTAGTCCTAGAAGCAACAAGAGATCTTCGCCGGAAGCAAGTGAGGAAGAGTGCATAAGCAATGGTTCTGATGTCACAAGTGATCAACAAGACAACGTTGTACCACCTGCAAAGGCACAAGTAGTGGGGTGGCCACCGATTCGATCTTACAGGAAGAATAACGTACAGCAGAAGAAAGAAGAAGAAAGTGAAGGGAATGGGATGTACGTGAAAGTGAGCATGGCGGGTGCACCTTATTTGAGGAAGATAGATCTCAAGGTTTACAAAAGCTACCCTGAACTTCTCAAGGCCTTGGAAAATATGTTCAAGTGCATATTTGGAGAATATTCAGAAAGGGAAGGGTACAATGGATCTGAATATGCTCCAACTTATGAAGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTTCCATGGCACATGTTCGTGTCATCTTGCAAGAGGCTCAGAATTATGAAGGGATCAGAAGCAAAAGGGTTGGGTTGTTTTTGA 588 0.4422 MENSLGSYEKELNLKATELRLGLPGSDEPEKRSSPRSNKRSSPEASEEECISNGSDVTSDQQDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWHMFVSSCKRLRIMKGSEAKGLGCF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01467 195 ProSiteProfiles PB1 domain profile. 99 186 IPR000270 GO:0005515
Viun7g01467 195 MobiDBLite consensus disorder prediction 16 70 - -
Viun7g01467 195 SUPERFAMILY CAD & PB1 domains 94 185 - -
Viun7g01467 195 Gene3D - 93 195 - -
Viun7g01467 195 MobiDBLite consensus disorder prediction 24 46 - -
Viun7g01467 195 MobiDBLite consensus disorder prediction 47 66 - -
Viun7g01467 195 FunFam Auxin-responsive protein 94 195 - -
Viun7g01467 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 190 IPR003311 GO:0005634|GO:0006355
Viun7g01467 195 Pfam AUX/IAA family 55 193 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01467 Viun-Chr7 18966958 18968275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01467 90 192 B3 DNA Binding Superfamily AT2G46530 36.893 7.74e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun7g01467 AUX_IAA 3.4e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01467 K14484 - gmx:100780752 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01467 7 18966958 18968275 Viun7g01467 7 18966958 18968275 ECH