Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01447 ATGGAAGAGGTTGAGCAAGCTAATAGAGCAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAAGTTCAGCATAGGAATTTAGTGGTGGAAACTGGAGATGCTGTGGTAAGGTTCAAGAAGGTTGTGTCCTTGCTTCAGAGTGGTTTGGGTCATGCAAGAGTGAGAAAGGTTAAAAACCCTCAAGTTCCCTTTACCCACCAAAGCATCTTCTTAGACAACCCAAATTGCAAAACCAACAACCATCACTCAAAAAATCTGCATGTTTTCCAACCCAGCTTTCCTGACAATTCAATTCAGGAACTGGGTTCAACCATTAAACATTCACTCTCTCTAGGACAGCCCTCTTTGGAATTGAGCTCCAGTGGGAAAAGTGCTCTTCACCTCACTCAGCAGGCTTCATCAACTCACTATCACTTCTTTCAGCAACAGCAACAGCAAAGGATGTTGCTCCAGCAGCAACAGCAGCAGCAGCAACAACAACAGCAGCAACATTTGAAGCATCAAGCAGAAATGATGTTCCGAAGGAGCAATAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATGTCATCCAATAGGTCTTTTATTTCTTCCTTGAGCATAGACGGAAGTGTGGCTAACTTGGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCGCAACAGCACAAGAGAAAATGTTCTGCAAGAGGCGATGAAGGAAGCTTGAAATGTGGGAGCAGTTCTAGATGTCATTGCTCTAAGAAGAGGAAACATAGAATGAAAAGGTCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATTCCCCCTGATGATTATTCATGGAGAAAGTATGGTCAAAAGCCAATCAAGGGCTCCCCTCACCCTAGGGGATACTATAAATGCAGCAGCATGAGAGGGTGTCCTGCTAGAAAGCATGTTGAGAGGTGCCTGGAAGAGCCAAGCATGCTAATTGTCACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACGCAATCTGCAAATGCATGA 1071 0.4435 MEEVEQANRAAVESCHRVLSLLSQPRDQVQHRNLVVETGDAVVRFKKVVSLLQSGLGHARVRKVKNPQVPFTHQSIFLDNPNCKTNNHHSKNLHVFQPSFPDNSIQELGSTIKHSLSLGQPSLELSSSGKSALHLTQQASSTHYHFFQQQQQQRMLLQQQQQQQQQQQQQHLKHQAEMMFRRSNSGINLNFDSTSCTPTMSSNRSFISSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSSRCHCSKKRKHRMKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPKLPTQSANA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01447 356 ProSiteProfiles WRKY domain profile. 283 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01447 356 Gene3D WRKY domain 273 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01447 356 FunFam WRKY transcription factor 65 272 349 - -
Viun7g01447 356 Coils Coil 147 177 - -
Viun7g01447 356 MobiDBLite consensus disorder prediction 229 257 - -
Viun7g01447 356 Pfam Plant zinc cluster domain 241 286 IPR018872 -
Viun7g01447 356 SUPERFAMILY WRKY DNA-binding domain 286 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g01447 356 Pfam WRKY DNA -binding domain 290 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g01447 356 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 354 IPR044810 GO:0003700
Viun7g01447 356 SMART WRKY_cls 288 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01447 Viun-Chr7 18819569 18822183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01447 1 353 WRKY Transcription Factor Family AT2G30590 57.963 4.51e-127 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g01447 WRKY 3.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01447 - - gmx:100170681 601.282