Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01442 ATGGTAATGGCAGAGTTGGTGGGTACTTTTATTTTGATGTTCTGTGTTTGTGGAATCAGTGCAAGCACAGAAGTCCAAAAGGGTGCAGTGGGCCTTGCGGAGTATGCAGCTACAGCAGGGTTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTATCACAATAGCCTTTGCTACAATGGGTGAATTTCCATGGTTGAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGCATACGGCATAAAATCAGATACTATCATGACCATGCCACTCCAAGGGTGCACCTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATCATGTTCCTCGTTGCAGCTTTGACATCTCAATCTCAGTCAGTGGGCCATTTATCTGGCTTTGTTGCTGGTATAGCAATTGGCCTTGGTGTGCTAATCACAGGACCAGTCTCAGGTGGATCCATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTGTCATGGAAGTTTAAGAACATATGGATATACATGGTAGCCCCCAGTGTTGGAGCTGTGGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAACATTCTACTACTTTGTTCTCCCCAAACATCAGTGACGCTGGTCGTCCAATACCCTTTTGCTCAAGTTAG 708 0.4576 MVMAELVGTFILMFCVCGISASTEVQKGAVGLAEYAATAGLTVVVIIFSIGPISCAHVNPAITIAFATMGEFPWLKVPVYIIAQTVGSMSATYIGSLAYGIKSDTIMTMPLQGCTSAFWVELIATFIIMFLVAALTSQSQSVGHLSGFVAGIAIGLGVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSVGAVAGAAMFRFLRLRDQHSTTLFSPNISDAGRPIPFCSS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01442 235 PRINTS Major intrinsic protein family signature 151 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun7g01442 235 PRINTS Major intrinsic protein family signature 39 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun7g01442 235 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun7g01442 235 PRINTS Major intrinsic protein family signature 188 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun7g01442 235 PRINTS Major intrinsic protein family signature 120 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun7g01442 235 ProSitePatterns MIP family signature. 57 65 IPR022357 -
Viun7g01442 235 SUPERFAMILY Aquaporin-like 2 215 IPR023271 -
Viun7g01442 235 PANTHER AQUAPORIN NIP2-1 2 214 IPR034294 -
Viun7g01442 235 Gene3D Glycerol uptake facilitator protein. 1 218 IPR023271 -
Viun7g01442 235 Pfam Major intrinsic protein 2 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01442 Viun-Chr7 18518071 18520076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01442 4 230 Major Intrinsic Protein MIP AT4G10380 40.529 6.25e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01442 K09874 - gmx:100817660 414.075