Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01416 ATGGGTCTTAGAGACATTGGTGCTTCACTGCCCCCAGGGTTTCGCTTTTATCCCAGTGATGAGGAGTTGGTCCTTCATTACCTCTACAAAAAGGTCACAAATGAAGAAATTCTCAAGGGTACCCTCATGGAAATCGACTTGCACACATGCGAGCCATGGCAACTTCCAGAGGTGGCTAAGCTTAACGCAAACGAATGGTACTTCTTCAGCTTTCGTGATCGCAAATATGCAACCGGCTACCGGACCAATCGCGCAACGACATCTGGGTATTGGAAAGCCACGGGAAAGGATCGTACGGTGTTCGACCCCTCCACGCGTGAGGTTGTAGGGATGAGGAAGACTTTGGTGTTCTACAGGAACAGGGCCCCGAATGGCATCAAAACGTGTTGGATCATGCACGAGTTTCGGTTGGAGACGCCACATATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAGGCAAATCAGACAACAGTGCCAAACTAAACTCACAACTCATGTATGAGAACACAGTTCCATCCCTAACTCTGGCTTCGTCATCTCCAACCAACCAAACCATTGGGTATAACCAACTTCCCCATTTCTCTTCCTCAATCACACCCCATCACAATCATCATCATCATCAAAATCAAAATCAAAGCCAAACCCAAAACAACAACTCCTTCATGGGCCTCCTTCACTTTTCTAGGGAAACAAATGCAAACTCTAGCACCATCACTCAGATAAGTCCCAAATGTGATGATGGGTATGGGTTTCTATGGGACATGGAGATCGAAGAAAATAGCTTCCATGATGGCGTGGCCTCCAACATGGTCGACGGAATGAGATTCGAGGTTGATAATAATAGTGTGGTCTTGTTATGA 873 0.4674 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKVTNEEILKGTLMEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPSTREVVGMRKTLVFYRNRAPNGIKTCWIMHEFRLETPHMPPKEDWVLCRVFHKGKSDNSAKLNSQLMYENTVPSLTLASSSPTNQTIGYNQLPHFSSSITPHHNHHHHQNQNQSQTQNNNSFMGLLHFSRETNANSSTITQISPKCDDGYGFLWDMEIEENSFHDGVASNMVDGMRFEVDNNSVVLL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01416 290 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Viun7g01416 290 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Viun7g01416 290 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Viun7g01416 290 MobiDBLite consensus disorder prediction 192 222 - -
Viun7g01416 290 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Viun7g01416 290 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01416 Viun-Chr7 18090097 18094361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01416 9 241 NAC Transcription Factor Family AT2G24430 45.607 1.70e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun7g01416 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01416 - - gmx:100783645 487.263