Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01399 ATGAGTGAATACCTCCAGCAAGACTACGTCGTTTCGGAGGAGATCGGCAGGGGAAGATTCGGTACCGTTTACCGATGCTCCTCGGCGGACTCCGGCGAGTCCTACGCCGTTAAATCGATCGACAAGGTAGCCATAACTGCCGGCGGAGACTCCCTGGACACCCAATGCCTCTTTACTGAGGCCAAGATCGTTCAGCTGCTCTCCCCTCACCCTCACATCGTCACTCTTCACAACCTCTACGAAGATGAAAAGCACCTCCACATGGTTCTCGACCTCTGTTACGAACCCACGTTTCATCTCCAGGTCATGCCGGAACGCGAAGCTGCTTCGATGATGTGGCAGCTCATGAAAGCCGTGAGCCACTGCCACCGTTTCGGTGTGGCCCACCGAGACATAAAGCCCGACAACATTCTTCTCGACAAGGAGAATCGGCTGAAGCTAGCCGATTTCGGCTCGGCTGACACTTTCAAAGAGGGCGACCTCATGAGCGCGGTGGTGGGAACACCGCATTACGTGGCTCCGGAGGTCCTCGCCGGAAGTGGTTATACCGAGAAAGTTGACGTGTGGAGTTGCGGCGTGGTTTTGTATCAGATGTTGGCGGGGGTTTTGCCCTTTCGAGGCGATTCCCCTGTGGAGATTTTTGAGGCTGTTCTGCACTCCAGTTTGAGATTCCCAACCTGGGTTTTCTCTTCTGTTTCACATTCCGCCAAGGATCTCCTTCGTAGAATGTTGTGCAGAGAAGTCTCTAGAAGGTTCTCTGCTGAACAAGTTCTGAGACACGGGTGGTTTAGCATTATTCAACAGAGTGACTGA 813 0.5351 MSEYLQQDYVVSEEIGRGRFGTVYRCSSADSGESYAVKSIDKVAITAGGDSLDTQCLFTEAKIVQLLSPHPHIVTLHNLYEDEKHLHMVLDLCYEPTFHLQVMPEREAASMMWQLMKAVSHCHRFGVAHRDIKPDNILLDKENRLKLADFGSADTFKEGDLMSAVVGTPHYVAPEVLAGSGYTEKVDVWSCGVVLYQMLAGVLPFRGDSPVEIFEAVLHSSLRFPTWVFSSVSHSAKDLLRRMLCREVSRRFSAEQVLRHGWFSIIQQSD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01399 270 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Viun7g01399 270 SUPERFAMILY Protein kinase-like (PK-like) 4 264 IPR011009 -
Viun7g01399 270 FunFam Maternal embryonic leucine zipper kinase 1 269 - -
Viun7g01399 270 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01399 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Viun7g01399 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 264 - -
Viun7g01399 270 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Viun7g01399 270 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01399 270 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01399 270 Gene3D Transferase(Phosphotransferase) domain 1 97 270 - -
Viun7g01399 270 CDD STKc_CAMK 8 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01399 Viun-Chr7 17701193 17702206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01399 9 263 EF-hand Containing Proteins AT1G50700 40.304 1.50e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun7g01399 Pkinase 6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01399 K08794 - gmx:547731 451.055