Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01384 ATGGACAAATGCTCAGAAGTTGCATCTCCTTCTTGCAGAGGCAGATCGAAGAAATCCAATCTCCAAAGCTCTAAGGTCCAATCTCCAAGCCCCGTTCGCTTCAGCTCCCAGACGCCGGAGAAACTGCCGCAGCGGATCCGTAACCGCGGCGTCGCGCTCTCCATCGCTGACATAAGAAAAGTCGGCAAAGGTTTACAGGAAACGAACCGACGCGGTGAAGAGACATCGTCGCAGCAGAGCAAGAGTGTGAGGAGACAGATCTCACTGTGGCCTTCTTCTCCCAGCAAATCCAAGATTACTTATGATGAATCCTCCAAGCTTCCCGAAAAATATGGTATTTTGGATCAGTTCTTCGATCGTTTGGATACTTTGATTTCAATGTTCCGCCTCAAAGGGAAGACTCCATCCTTTACAGAGATCAGTTCTAGAATTGAATCTTTAACTGACAGGAGGTTTACTCATGGGCATCTAGCCCAATTGCAATATATCTTGCCTGAGGCTATTGTTCTTAAGAAGTTTCTTGTGCATGACGAACGGACTTGTTGTATGAAGCCGGATATTCATATTTCTTTAAACCCTGAAGGGGTAGAGTCTGATGTAAAAGGTCACCCTCAACGTAGGAGAGTATCGTTGAAGAAGTTGTTTCAGTCCCGACTAAGGGATTTTTTTGAATCTCATCCCGAGGGTGATGAAATTCCTGAAGGAACATTGCCTGAGCCATTCAATCGCCCAAAGAAAGATAATATTTTGGACATGTTTGAAACTCGTCTCCCAACGAAAATGTCAACCTGCATGCGCTACAATGACATTGTCAATAATACCGAGCCTGCTGACATAGATGAAAAATCGTTAGTTACTTCATCAGCTGAGTTGCCTAATGAACATCTGACAGCACCTTCTCACATTGCTCCATCCTTTAGAGCTCGATTTTCTTTGAAATTTAAACTAAATGGAACAGATGAAGTACAACATAGTTCTCCATCAGTTTCATTACAACCTTCCCCATCCGATTTGGCTTCAGAAGCTGCTAGTAGTGTAAAGTGTTCAACAAGTTGTGAATCTCTGGATTCATCCAGCGCTCTCCGTTCTACTCCAAGCAAATCCATTGAGTACACAGGAAACAGAGATGGGTCTCTCACGAGCATTAGTGCCGTCTCAACTCCCACGAGAAAAACATTTGAGTACACAGAAAACAAAGATGGGTCTCTCACCAGCATTGATGCCGTCTCGACTCCAGCTAGAGAAATCAATGAATGCACAGTACACAAAGATTCTTCTCTCAAAAGCATTGATGCCATGTCAACTCCCGCTAAACTTGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCATTGTGTTCACCCAAAAGACATTATATGAGCCCAGATGACCACTCTATCAGTTCTTTGAACAAGTTAGCTAGGCGTCCACCTCGCTCAAGGTCATTGAAATTTGACACTCCAGTGAAGAACAAGGAGTCTATGAATGAAGACAATGACTGTGCCTTACCAATAGATGATGACGTTTTTGAAATCCTCCCTGGAAAACTTATCCAATCGATTAGGGAAAAGGAAAGAATAGCGATGGAGGAAAGACACCCGGCTATCACTCAAGCAAAGAAAAGGAAAAAAATAATAGCAAGCCTCCCTAAGCTGTTTGATATGATTCGCCTCTTACTTCGACAGCGTAATAGTATGACGAAAGTGGAGCTTGTAAGCAAGATAATCTCAAGCCACAGCGATATTGTTGATAGAAGTGAAGTTGAAGAGCAGCTAAGCTTGTTGCAAGAACTAGCACCGGAATGGATTTCTGAGAAGCAAGTCTCTAGTGGGGATTTTCTATTATTCATAAACAAAATGTTGAGCCCCGAAACCATTCGAGCATCTCTTGAAGAAGCAACGTAG 1908 0.4334 MDKCSEVASPSCRGRSKKSNLQSSKVQSPSPVRFSSQTPEKLPQRIRNRGVALSIADIRKVGKGLQETNRRGEETSSQQSKSVRRQISLWPSSPSKSKITYDESSKLPEKYGILDQFFDRLDTLISMFRLKGKTPSFTEISSRIESLTDRRFTHGHLAQLQYILPEAIVLKKFLVHDERTCCMKPDIHISLNPEGVESDVKGHPQRRRVSLKKLFQSRLRDFFESHPEGDEIPEGTLPEPFNRPKKDNILDMFETRLPTKMSTCMRYNDIVNNTEPADIDEKSLVTSSAELPNEHLTAPSHIAPSFRARFSLKFKLNGTDEVQHSSPSVSLQPSPSDLASEAASSVKCSTSCESLDSSSALRSTPSKSIEYTGNRDGSLTSISAVSTPTRKTFEYTENKDGSLTSIDAVSTPAREINECTVHKDSSLKSIDAMSTPAKLVSTPIRLMSATPALCSPKRHYMSPDDHSISSLNKLARRPPRSRSLKFDTPVKNKESMNEDNDCALPIDDDVFEILPGKLIQSIREKERIAMEERHPAITQAKKRKKIIASLPKLFDMIRLLLRQRNSMTKVELVSKIISSHSDIVDRSEVEEQLSLLQELAPEWISEKQVSSGDFLLFINKMLSPETIRASLEEAT 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01384 635 MobiDBLite consensus disorder prediction 357 377 - -
Viun7g01384 635 MobiDBLite consensus disorder prediction 1 49 - -
Viun7g01384 635 SMART CDT1_2 107 239 IPR014939 -
Viun7g01384 635 FunFam CDT1-like protein a chloroplastic 507 635 - -
Viun7g01384 635 CDD Cdt1_c 508 632 IPR032054 -
Viun7g01384 635 CDD Cdt1_m 106 247 IPR014939 -
Viun7g01384 635 MobiDBLite consensus disorder prediction 71 95 - -
Viun7g01384 635 Pfam DNA replication factor Cdt1 C-terminal domain 518 609 IPR032054 -
Viun7g01384 635 PANTHER DNA REPLICATION FACTOR CDT1 17 634 IPR045173 GO:0003677|GO:0030174|GO:0071163
Viun7g01384 635 MobiDBLite consensus disorder prediction 460 483 - -
Viun7g01384 635 SUPERFAMILY "Winged helix" DNA-binding domain 102 241 IPR036390 -
Viun7g01384 635 MobiDBLite consensus disorder prediction 64 95 - -
Viun7g01384 635 Gene3D - 508 635 IPR038090 -
Viun7g01384 635 MobiDBLite consensus disorder prediction 12 43 - -
Viun7g01384 635 MobiDBLite consensus disorder prediction 225 245 - -
Viun7g01384 635 Pfam DNA replication factor CDT1 like 107 174 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01384 Viun-Chr7 17245704 17248979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01384 434 633 Core DNA Replication Machinery Family AT2G31270 49.065 4.73e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01384 K10727 - gmx:100778818 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01384 7 17245704 17248979 Viun7g01384 7 17245704 17248979 ECH