Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01380 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACACCGGGCTCGGATGATCCTGACTTGGGAGGACGCTTACTATGACAATCCCAATATTTGTGACTCTTCTGGAAATAAGAGCTGCCAGAATACATGGGAGCGGAATGGCAGTGCAGATTTTTCGCATGATCCTCTAGAGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACAGGAAAACATCGGTGGATATGTGTAGATAATCAAGTTACAAGCTCTGGCCCATCTTTGGAGTTTGCTGATGGATGGCAATCTCAATTTTCTGCTGGAATTAGGACCATTGTTGTTATAGCCGTAGTCCCCATTGGAGTTGTTCAACTTGGTTCCTTGAATAAACTGGATTCAAAAACTTCAGAAAGTGTGCCTGCTTACTTGCACAATACAGAGAAAACCATGAAGCATGAATCACTGGATAATTTAATGCCCTTTCAAGGTCCTGGGAACAATTATTTACCTCATACTGTGAATCAGAAGATGACTGTTGATGTGGCCAAGCATGAGGGACCAGAATTATACAGTGATGGAAATTTCATTTTGCTTCAGTCAATGTCTAATATGATGAATGTGGAGCAGCAGAAATTTTTAGGGATGAGACCTGTAAATGAGAGAAAGTTTGAAGGGAACAGTGGTGGCTGTGATGATACAAGTGTGGAATCAGGAAAAAAATTGTCATCTTTTTTACATAATTTGGTTACGGGTAATAATGGTGTAAATGATTTAGTATGTCCATCTAGAAATGTTGGCGTTGATTCTGTATCCTTCTCTTCAGACTTTGTTGATACAGCTGTCTTTGAGAGTGAAAAGTTTCATTATGTGGATATCAACCAAAAAGGAGTGTTGAACTGGCCCAGACCTTCAGATGCATACTCCCGAAAAGATATTGGGAAGTCAAAGTTTCAGACTGAACCTTGTTCCAAGGATACCTCATACACTTTGAAGTTTCCTGCTGGTTATGAGTTACATGAAGCACTTGGTCCAAGTTTTCTAAAAGGGAGCAAATATTTTGATTGGGCAGTAAAGGCAAATCAAGATGTTAAAGCCACTGAGATGTCAGATGAGCTAAGCTGTAGCCAATTGACTTCTGAATCAGAGCATCTCTTAGAAGCTATGGTGGCTAACATCTGCCATAGGAATAATAATGTCAATAGCGAGTTATCATTTTCTACAACAATGCAGGCTGCAATAGCATCAGGAAACAATCTCGAGGGTTCCACTCACACTATCCACACCATAAATTCTGAAAGCTGTTCAACAGATCAGCCTCACCTTGGTAGAGAGGAAAAACATTATAATTTGGGTTCATCTGGGATATGTGGTATAATGTCCCCAAAGGGTTTTTCTTCTACATGTCCTAGTTCCTGTAGTGAACAGTTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCGCTACTGGAGTGCACCATAAAACACATGCTCTTTCTCAAGAATGTAACCATGCATGCTGACAAGCTAAATAAATTTGCGGACTCAAAGACTAAGTTGCATCACATGGAAAAAGATATTAACGGATCATCAAGTCATCAACAAGGTTCAAGTTGGGCAATGGAAGTCGGAGGCCATCTGAAAGTTCGTTCCATATTAGTGGAGAATCTTAATAAGAATGGCCAGATGCTTGTTGAGATGTTGTGTGAGGAGTGTAGCCATTTTCTTGAGATAGCAGAAGCCATCAGAAGCATGGGCCTGACAATATTGAATGGTGCAACAGAAGCTCATGGCGAGAAGACATGTATATGTTTTGTGGTTGAGGCAGGATCAGAAGGCCAAAACAACAGAAACTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACTATGTATTCATAA 2103 0.4108 MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYDNPNICDSSGNKSCQNTWERNGSADFSHDPLELAVAKMSYHVYSLGEGIVGQVAVTGKHRWICVDNQVTSSGPSLEFADGWQSQFSAGIRTIVVIAVVPIGVVQLGSLNKLDSKTSESVPAYLHNTEKTMKHESLDNLMPFQGPGNNYLPHTVNQKMTVDVAKHEGPELYSDGNFILLQSMSNMMNVEQQKFLGMRPVNERKFEGNSGGCDDTSVESGKKLSSFLHNLVTGNNGVNDLVCPSRNVGVDSVSFSSDFVDTAVFESEKFHYVDINQKGVLNWPRPSDAYSRKDIGKSKFQTEPCSKDTSYTLKFPAGYELHEALGPSFLKGSKYFDWAVKANQDVKATEMSDELSCSQLTSESEHLLEAMVANICHRNNNVNSELSFSTTMQAAIASGNNLEGSTHTIHTINSESCSTDQPHLGREEKHYNLGSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTMHADKLNKFADSKTKLHHMEKDINGSSSHQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEAGSEGQNNRNLHRLDILWPLVQLLQSKSTMYS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01380 700 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 511 560 IPR011598 GO:0046983
Viun7g01380 700 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 153 IPR025610 -
Viun7g01380 700 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 203 698 IPR043561 GO:0003700|GO:0006355
Viun7g01380 700 MobiDBLite consensus disorder prediction 496 525 - -
Viun7g01380 700 MobiDBLite consensus disorder prediction 501 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01380 Viun-Chr7 17164209 17170877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01380 355 696 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 51.117 2.39e-93 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01380 - - gmx:100777740 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01380 7 17164209 17170877 Viun7g01380 7 17164209 17170877 ECH
Viun1g02090 1 32259346 32266114 Viun7g01380 7 17164209 17170877 PCT