Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01371 ATGGCTTCTGCAACAACTGCAAATGACGCTGCTTCTGCTTCTTCTTCTTCCTTAGGATCTCCCTGTGGGGCATGCAAGTTCCTGCGAAGAAAATGTGCTGCAGACTGCATCTTTGCACCCTACTTTTGCTCCGAACAAGGAGCTGCAAGATTCGCAGCCATTCATAAGGTTTTCGGGGCTAGCAACGTTTCCAAGTTGCTCTTGCGTATACCAGATAACGATCGTTTTGAGGCAATGGTCACAATCGCTTATGAAGCCCAAGCTCGCATCAGAGACCCCGTTTACGGTTGTGTCTCCCATATATTCGCCCTGCAACAACAGGTAGCAAGCTTGCAGGCACAGCTAGTGCAAATGAAGGCACAGCTGGATCAGAACCAGATGGTGTACAGGAGCATGGAGAATCATTGGTCAGAGAATGTTGGACAAACATTCAATCCGTTTTGTCTCACTTCCATGAATAATCCTATTTCTCCTCAGAGCTCACTTGATTCAATTGATTACACCAGCAATATAAATGATGGAATAAGCATGCAAGATGTGCACAACGGAGATGATTTCTCATTCCAAGCTTGTTCTTGGAAAAGATCATACAGCAATGACTTGGGTGAGCTGCAAGAATTGGCACTCAGAATGATGAGGAAGTGTGATTAG 651 0.4547 MASATTANDAASASSSSLGSPCGACKFLRRKCAADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLRIPDNDRFEAMVTIAYEAQARIRDPVYGCVSHIFALQQQVASLQAQLVQMKAQLDQNQMVYRSMENHWSENVGQTFNPFCLTSMNNPISPQSSLDSIDYTSNINDGISMQDVHNGDDFSFQACSWKRSYSNDLGELQELALRMMRKCD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01371 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 17 151 - -
Viun7g01371 216 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g01371 216 Coils Coil 101 121 - -
Viun7g01371 216 Pfam Lateral organ boundaries (LOB) domain 21 119 IPR004883 -
Viun7g01371 216 ProSiteProfiles LOB domain profile. 20 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01371 Viun-Chr7 16769933 16771171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01371 10 213 AS2 family AT2G42430 50.207 1.99e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun7g01371 LOB 1.8e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02086 1 32218668 32220260 Viun7g01371 7 16769933 16771171 PCT