Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01321 ATGGGGATTCCAGAAAATATTGTTGTTGATTCTCATGTTTGGGTTGGAGATCCAGAAGTAGTTTGGATTGCTGGCCAGGTACTGAGTATCACTGGAGAAGATGCTGAAATTCAAATTGGTGATGAGAGGAAGGTTATTTCCCGTTTGTCAAAATTATATCCCAAGGATATCGATGCGCCTGCTGATGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGCAGTGCTGCATAATTTGGAAACTAGATATATGATGAATGAAATATATACTTATACCGGAAATATTCTCATTGCAATCAATCCTTTCCAAAGTCTTTCACATCTCTATGATACTAATGTGATGCAAAGATACAAGGGAGCAACGACCGGAGACTTGAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGAAATGATGAATGAGGTGAAAAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACTAAAATGCTTATGCAGTACCTGGCATATTTAGGTGGTCACACTGCATCTGAAGGTCGAACAGTTGAAAAACAGGTTCTAGAGTCAAATCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATCCAATTTGATAAGTTTGGACGAATATCTGGTGCAGCCATTAGAACTTACCTGCTTGAGAAATCTCGTGTTTGCCAAATCTCAGATCCCGAGCGTAACTATCACTGTTTTTACCTTCTCTGCGCTTCTCCTCCGGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAACCAATCCAATTGCTACGAATTAGTTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGACGAGCAGGATGCTATTTTCAGAGTTGTAGCTGGTATTCTTCATCTTGGGAATATCACGTTTTCAAGATCAGAAGAAACGGATTTCGCAGTTCTAGAAGAAGAGGAATCCAAGTTTCATCTACAAACGACAGCAGAACTTCTTATGTGTGATGTGCATGCTTTGGAAGATGCACTATGTAAGCGTATGATGGTTACTCCAGAAGAAATCATCAAAAAAAGTCTTGACCCTCTGGGTGCCACAGTTAGCAGGGATGGTTTAGCCAAAACCATATATTCTCGTTTATTTGACTGGTTAGTTCAAAAAATTAATATCTCCATTGGGCAGGATCCTAGCTCAAAATGTCTCATTGGTGTTCTTGACATATACGGCTTTGAAAGCTTCCAAACAAATAGCTTTGAGCAGTTTTGTATAAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAGGAGGAATATACGAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGAAACCTGGTGGAATTATTGCTCTGCTTGATGAAGCTTGTATGTTTCCTAAGTCAACTCATGAAACGTTTTCGCAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATTAAGCCAAAATTGGCACGTTCAGACTTCACTGTTTGTCACTATGCGGGAGATGTTCAGTATCAATCTGAGCACTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGAGATGCTAAGTGCTTCCAAATGTTCATTTGTATCAGGTCTTTTCCCTCCACTTTCTGAGGAGTCAGCCAAATCTTCTAAGTTTTCTTCCATTGGTTCTCGTTTCAAGCTACAATTACAACAATTGATGGATACACTCAATCTGACAGAGCCACACTATATTAGATGTGTGAAGCCAAATACTCAACTAAAACCTTTCATATTTGAACATATGAACGTCATCCAGCAATTACGATCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGCGCTGGATTTCCCACTCACTGGACCTTTCATGATTTTTTAACTCGATTATGGATTCTTGCTCCAGAGATTCTTCGAGGGAACTTTGATGAAAAGGATTCGTGTAGAAAGATTTTGGAGAAGATTGGGCTGACAGGTTATCAGATAGGGGAAACAAAAATATTCTTAAGAGCTGGTCAGATGTCTGAATTGGATGCTCGGAGGGCATTCCTGCTTAGTAGTTCAGCTACAGTTATTCAAAAGAATGCTAAAACTCGTTATAGTCGGAAAACATATATTGATTTGCGAAAGTGCTCTCTTTTCCTACAATCCATTTGCAGAGGAGAACTGGCTCGAAGATTGTATTATCGCATGAAATATAGGCAAGTTGCTGCCGTCAGAATTCAAAAGCAGATGCGTCGAACAGTGGCTAGGAAGCAGTATGTTGAAATAAAGTTCTGTGCAAATGTCTTGCAGACAGGTTTTCGAGCAATGGCTGCTTGTAATCAATTTAGATATAAAAAGCAAACATATAGAAAGCAGACTAGTGCATCAACTACTATTCAGTCCCATTGGCGTCGGCATAAAGCTCTCGTTGACTATCAGAACCTTAAGAAAGCATCAATCATTCAACAAAGCAGCAGCTCCTGTGATACACAAGAAGAGAAGGTTTCAGAGACTCTTCTGCAAAATGAAAGTCCTTGTATGGAAGAATCTTCATATCCTGTGCATGAAGAATCCTCAAATCCTGTGCAAGAAGACGAAAGTATTGAAGCTATCAGGGATTCTTCTAGTCCTCTCAAAGACACTGACAAGATTGAGGTTCTTGCTGTAGAAATGAAAAACTTAAAGGTCAAGTTGCACGCAGAAAAACAAAGAGGTGATGAATATGAAAGGAAATATGCAGAAGCTCAAGGATCCAATGAAGAGTTACGCAAAATATTAGCAGAAACTGAAAAAAAAGTATATCAGCTTCAGGACACTTGGAACAGGATGATATCTTCCGTGTCAAGTCAAGTTGCCGAGCTGAAGACGACCTCGAGTACTTCATCAAGATTGAGTTCAAGTTTTCGACCTATAGCTAGGGTTGACGTTGCTTCTAGTAACTCTGATACTTCGTCTACAGACTCTGATTTCACATTTCCAGCTCCTGCTTCAAATCCAGAACCTCAGGAGTCAAATTCTTTCCCGCTAGTAGTTCAGGATGTCACTGCAGGGGATGGATCGGGATCTGAAAGTGGAAAGGAGGGTTCATTTGATGATTTCTTCTAG 3240 0.3972 MGIPENIVVDSHVWVGDPEVVWIAGQVLSITGEDAEIQIGDERKVISRLSKLYPKDIDAPADGVDDMTKLAYLHEPAVLHNLETRYMMNEIYTYTGNILIAINPFQSLSHLYDTNVMQRYKGATTGDLSPHVFAIAEAAYREMMNEVKSNSILVSGESGAGKTETTKMLMQYLAYLGGHTASEGRTVEKQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKFGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPKSFHYLNQSNCYELVGVNAAQEYLSTKRAMDIVGISQDEQDAIFRVVAGILHLGNITFSRSEETDFAVLEEEESKFHLQTTAELLMCDVHALEDALCKRMMVTPEEIIKKSLDPLGATVSRDGLAKTIYSRLFDWLVQKINISIGQDPSSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTVCHYAGDVQYQSEHFLDKNKDYVVPEHQEMLSASKCSFVSGLFPPLSEESAKSSKFSSIGSRFKLQLQQLMDTLNLTEPHYIRCVKPNTQLKPFIFEHMNVIQQLRSGGVLEAVRIKCAGFPTHWTFHDFLTRLWILAPEILRGNFDEKDSCRKILEKIGLTGYQIGETKIFLRAGQMSELDARRAFLLSSSATVIQKNAKTRYSRKTYIDLRKCSLFLQSICRGELARRLYYRMKYRQVAAVRIQKQMRRTVARKQYVEIKFCANVLQTGFRAMAACNQFRYKKQTYRKQTSASTTIQSHWRRHKALVDYQNLKKASIIQQSSSSCDTQEEKVSETLLQNESPCMEESSYPVHEESSNPVQEDESIEAIRDSSSPLKDTDKIEVLAVEMKNLKVKLHAEKQRGDEYERKYAEAQGSNEELRKILAETEKKVYQLQDTWNRMISSVSSQVAELKTTSSTSSRLSSSFRPIARVDVASSNSDTSSTDSDFTFPAPASNPEPQESNSFPLVVQDVTAGDGSGSESGKEGSFDDFF 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01321 1079 Pfam IQ calmodulin-binding motif 787 804 IPR000048 GO:0005515
Viun7g01321 1079 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Viun7g01321 1079 Pfam IQ calmodulin-binding motif 839 854 IPR000048 GO:0005515
Viun7g01321 1079 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 FunFam Myosin heavy chain 252 307 - -
Viun7g01321 1079 Gene3D - 735 787 - -
Viun7g01321 1079 CDD MYSc_Myo11 76 720 IPR036018 -
Viun7g01321 1079 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Viun7g01321 1079 MobiDBLite consensus disorder prediction 1019 1056 - -
Viun7g01321 1079 FunFam Class V myosin 439 582 - -
Viun7g01321 1079 Gene3D - 667 733 - -
Viun7g01321 1079 Gene3D - 252 310 - -
Viun7g01321 1079 Coils Coil 929 984 - -
Viun7g01321 1079 MobiDBLite consensus disorder prediction 1019 1079 - -
Viun7g01321 1079 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Viun7g01321 1079 MobiDBLite consensus disorder prediction 904 921 - -
Viun7g01321 1079 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 783 IPR027417 -
Viun7g01321 1079 FunFam Myosin 2 312 426 - -
Viun7g01321 1079 MobiDBLite consensus disorder prediction 889 903 - -
Viun7g01321 1079 Gene3D Kinesin motor domain 65 662 IPR036961 -
Viun7g01321 1079 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 Gene3D - 439 623 - -
Viun7g01321 1079 ProSiteProfiles IQ motif profile. 784 808 IPR000048 GO:0005515
Viun7g01321 1079 PANTHER MYOSIN 780 1004 - -
Viun7g01321 1079 SMART iq_5 757 779 IPR000048 GO:0005515
Viun7g01321 1079 SMART iq_5 783 805 IPR000048 GO:0005515
Viun7g01321 1079 SMART iq_5 734 756 IPR000048 GO:0005515
Viun7g01321 1079 SMART iq_5 836 858 IPR000048 GO:0005515
Viun7g01321 1079 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun7g01321 1079 MobiDBLite consensus disorder prediction 889 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01321 Viun-Chr7 15829657 15850987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01321 1 988 Myosins gene family AT1G54560 63.244 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01321 K10357 - gmx:100803485 1809.65