Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01314 ATGAATAGCTCTCTCTTCAATGGCCGGGTACTTGCTCATAGATCCACAACAATGGCGGCAGAAGATTCCCCTGGAATTCGCGTCCGAGGGATGCAATTTTCCTATGAAACGCAGCAACCGCCGCTCTTCCTCGACTTTAACCTCAACATCGAACCTGGATCGCGGTGCCTACTCGTCGGTGCCAATGGATCAGGTAAGACGACTTTGCTAAAGATTCTAGCGGGGAAGCATATGGTTGGAGGAAGAGATGTTGTACGCGTGTTGAATGGTTCTGCTTTTCATGACACTCAACTCGTTTGCAGTGGAGATCTCGCTTATTTGGGTGGATCCTGGAGCAAAAACGTTGGCTCCGCTGGAGAAATTCCGCTTCAAGGAGACTTCTCTGCGGAACATATGATCTTTGGAGTTGAGGGTGCTGACCCAGATAGGAGAGACAAGTTAATTGAGCTGCTTGGTATCGATCTGCAGTGGCGAATGCACAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTCTTTATCCATATAAGGTTCTCTTGCTTGATGAGGTCACTGTTGATCTGGATGTTGTGACTCGGATGGATTTGTTGGAATTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGGCATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAATAGCAGAAAAGATATCAGATGTCAATGAGTTGAAATCTTCCACTAATCTGCTGTCTGTTGTTGAGGCCTGGCTCCGTGCTGAAACAAAGGTTGTAAAGAAGAAACCTGTCCAGAAGACTTTTGCTAGTTCTCCTTTCTTTTCATCCAGACACATGGCGTATTATCGATAG 894 0.4597 MNSSLFNGRVLAHRSTTMAAEDSPGIRVRGMQFSYETQQPPLFLDFNLNIEPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDKLIELLGIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVVTRMDLLEFFREECEQREATIVYATHIFDGLEAWATHLAYIQDGELRIAEKISDVNELKSSTNLLSVVEAWLRAETKVVKKKPVQKTFASSPFFSSRHMAYYR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01314 297 Pfam ABC transporter 45 189 IPR003439 GO:0005524
Viun7g01314 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 252 IPR027417 -
Viun7g01314 297 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 262 IPR003439 GO:0005524
Viun7g01314 297 FunFam ABC transporter I family member 21 127 292 - -
Viun7g01314 297 Gene3D - 25 283 IPR027417 -
Viun7g01314 297 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 26 266 - -
Viun7g01314 297 SMART AAA_5 52 239 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01314 Viun-Chr7 15342118 15350560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01314 26 254 Calmodulin-binding Proteins AT2G36910 23.457 2.39e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01314 K12608 - gmx:100788503 499.59